CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTCAACAACCTGTTCAATTCATTGTTACCAATAGCTACAAAAGT
AAGATTATCAGAGTGAATATTTATTTGCTTTAATATGTATTTGATAAGAA
GAAAAGGTACTTTTAAGATAAGACACAACCTAGCAAAGAAGTAAAATAGA
ATGTGCTACATATTGGTACAATACCTATAATTATTCATAGGTTTTGTGTA
AAAACAGTTTTTTTTTGTCCTACAGAATAATCTACCAGACTGAAATTAGT
TGTTTCTCAACTGTACAAAATCTACAGGTTATCATACAACTGCATCTAGT
GTGAGGCTTTTAATCAAGACTCGACTCAACAATGTTTCTTTCTTATAAGC
ACAAATAATTTGCTACCCCTTCTTCATGGTCAGTATATAGAGACCACCTT
CTTTACATTTGGCCTCATTGTTTACTCATGTGCAGCAAGATTGCTGTCTG
GAGTTATCAGAATCTTAATGTCTTTTTAGCATCCACAATCACTCCTTTGT
ATTTCTTAAGATAACAAACTCAGCACTTTGCATTTGTCTGCACCTAAAGT
ATCTGCAAATTCTTGTGAATTTCTTCTTCAGGTTCACGTAATTCCCTCCT
ATTCTTGGACAGCTAAAAATACCTCTCATTACCATTTATGAGACAAAATC
TCATAAATAAATACAAAATATATTTTCTTGGAAGAGGCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTGTAAACTCAAGAAGAAGGAAG
AGCAAAGTGACACTTTGATCCTTCTTAGAAAGAGGAATAAAATAGCCACG
GAAGGAGTTACTGAGACAAAGTTCGGAGCAGAGAATGAAGGAAATGACCA
ACCAGAAACTGCCCCACCTGGGGATCCATCCCATAAACAATCACTAAACC
CAGACACTATTGCAAATGCCAGCAAGAGCTTGCTGATAGGAGCCTGATAT
AGCTGTCTCCTGGGAGGCTCTGCCAGTGCCTGACTAATACAGAAGTGGAT
GCTCACAGTCATCTATTAGGCAGAGCACAGGGTCCCCAATGAATGAGCTA
GAAAAAGTACCCAAGCCCCTGAAGGGGTTTGCAGCCCCCCTAGGAGGAAT
AACAATATGAACTAATCAGTAACCCCAGAGCTCCCTGGAACTAAACCACC
AATCAAAGAAAACACATGATTCCTGACTCTAGCTGCATATGTAGCAGAGG
ATGGCCTAGTCGGTTATCAATGGGAGGAGAGACCCTTGGTCCTGTGAAGG
TTCTGTGACCCAGCATAGGGGATTGCCTGGGTCAGGAAGCAGGAGTGAGT
GGTTTGTTGAACAGAGAGAGGTGGAGAGTTTTACCCCCCTTCTTTTTTCT
CTTTCCTTCCTCACCCCTTTGCTTTTTTTCTTTTCCCTCCCCCCACTCTT
G

Query= MSMg01no167_k08.b1 MSMg01no167_k08.b1 CHROMAT_FILE:
MSMg01no167_k08.b1 PHD_FILE: MSMg01no167_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:36:28 2005
         (691 letters)



>mm_chr17_94172266_94173353
          Length = 1088

 Score = 1220 bits (631), Expect = 0.0
 Identities = 674/689 (97%), Gaps = 5/689 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctctcaacaacctgttcaattcattgttaccaatagctacaaaagtaagattat 63
           ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 ggaattctctcaataacatgttcaattcattgttaccaatagctacaaaagtaagattat 829

                                                                       
Query: 64  cagagtgaatatttatttgctttaatatgtatttgataagaagaaaaggtacttttaaga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 cagagtgaatatttatttgctttaatatgtatttgataagaagaaaaggtacttttaaga 769

                                                                       
Query: 124 taagacacaacctagcaaagaagtaaaatagaatgtgctacatattggtacaatacctat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 taagacacaacctagcaaagaagtaaaatagaatgtgctacatattggtacaatacctat 709

                                                                       
Query: 184 aattattcataggttttgtgtaaaaacagtttttttttgtcctacagaataatctaccag 243
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 708 aattattcgtaggttttgtgtaaaaacagtttttttttgtcctacagaataatctactag 649

                                                                       
Query: 244 actgaaattagttgtttctcaactgtacaa-aatctacaggttatcatacaactgcatct 302
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 648 actgaaattagttgtttctcaactgtacaataatctacaggttatcatacaactgcatct 589

                                                                       
Query: 303 agtgtgaggcttttaatcaagactcgactcaacaatgtttctttcttataagcacaaata 362
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 588 agtgtgaggcttttaatcaagactcgactcaacaatgtttctttcttataagcacacata 529

                                                                       
Query: 363 atttgctaccccttcttcatggtcagtatatagagaccaccttctttacatttggcctca 422
           |||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 528 atttgctacaatttcttcatggtcagtatatagagaccaccttctttacatttggcctta 469

                                                                       
Query: 423 ttgtttactcatgtgcagcaagattgctgtctggagttatcagaatcttaatgtcttttt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ttgtttactcatgtgcagcaagattgctgtctggagttatcagaatcttaatgtcttttt 409

                                                                       
Query: 483 agcatccacaatcactcctttgtatttcttaagataacaaactcagcactttgcatttgt 542
           ||||||||| ||||||||||||  ||| ||||||||||||||||||||||||||||||||
Sbjct: 408 agcatccacgatcactcctttg--ttt-ttaagataacaaactcagcactttgcatttgt 352

                                                                       
Query: 543 ctgcacctaaagtatctgcaaattcttgtgaatttcttcttcaggttcacgtaattccct 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctgcacctaaagtatctgcaaattcttgtgaatttcttcttcaggttcacgtaattccct 292

                                                                       
Query: 603 cctattcttggacagctaaaaatacctctcattaccatttatgagacaaaatctcataaa 662
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cctattcttggacagct-aaaatacctctcattaccatttatgagacaaaatctcataaa 233

                                        
Query: 663 taaatacaaaatatattttcttggaagag 691
           |||||||||||||||||||||||||||||
Sbjct: 232 taaatacaaaatatattttcttggaagag 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1088
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1078
Effective search space:   734118
Effective search space used:   734118
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)