Query= MSMg01no168_f18.b1 MSMg01no168_f18.b1 CHROMAT_FILE:
MSMg01no168_f18.b1 PHD_FILE: MSMg01no168_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:31 2005
(313 letters)
>mm_chr17_66181212_66181924
Length = 713
Score = 553 bits (286), Expect = e-162
Identities = 301/306 (98%)
Strand = Plus / Plus
Query: 5 gaattccaaacacatgtgtacactttgattttctacatttttatagagggggacgtgacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaacacatgtgtacactttgattttctacatttttatagagggggacgtgacc 264
Query: 65 ttaactctttggtttgttttcctgagctagtgtctcgccatgtagttctggtttgcccag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaactctttggtttgttttcctgagctagtgtctcgccatgtagttctggtttgcccag 324
Query: 125 agggccgtctgcctgcttcttcctcctgagggttagggttggtattaaaagtgtggactg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agggccgtctgcctgcttcttcctcctgagggttagggttggtattaaaagtgtggactg 384
Query: 185 ccaagcccagctccagtgtaagtttacagttaccatagaaggaatgtggcttcaactttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaagcccagctccagtgtaagtttacagttaccatagaaggaatgtggcttcaactttt 444
Query: 245 tctttattttgacatacttctggtactatttttattccaagctggcttcagaattgatcc 304
|||||||||||||||||||||||||| | | || |||||||||||||||||||||||||
Sbjct: 445 tctttattttgacatacttctggtacaacatctagtccaagctggcttcagaattgatcc 504
Query: 305 tcctgc 310
||||||
Sbjct: 505 tcctgc 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_f18.g1 MSMg01no168_f18.g1 CHROMAT_FILE:
MSMg01no168_f18.g1 PHD_FILE: MSMg01no168_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:32 2005
(282 letters)
>mm_chr17_66307212_66307897
Length = 686
Score = 503 bits (260), Expect = e-147
Identities = 278/286 (97%), Gaps = 4/286 (1%)
Strand = Plus / Minus
Query: 1 ctgctccataaaacctgtgaaagaatgaaacatactaggccactgagttttggggtgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ctgctccataaaacctgtgaaagaatgaaacatactaggccactgagttttggggtgatt 510
Query: 61 tatttcaaagcaacaatagccaaaatctttctaggacttgcgatcaaggtcattttccga 120
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 509 tatttcatagcaacaatagccaaaatctatctaggacttgcgatcaaggtcattttccga 450
Query: 121 ggtgatgttggaaggtaggctggatgctgcttggccagagatacacttagctgattgaaa 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 449 ggtgatgttggaaggtaggctggatgttgcttggccagagatacacttagctgattgaaa 390
Query: 181 ttctgcagttttcttgggcatcagcc----ctagcgtctggtggttgtttttctctcgtt 236
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 389 ttctgcagttttcttgggcatcagccctagctagcgtctggtggttgtttttctctcgtt 330
Query: 237 gttttgtttttaattagcgtaggttgttttccaagttggggcaagg 282
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 329 gttttgtttttaattagcgtaggttgatttccaagttggggcaagg 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 686
Length adjustment: 9
Effective length of query: 273
Effective length of database: 677
Effective search space: 184821
Effective search space used: 184821
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
