Query= MSMg01no168_p19.b1 MSMg01no168_p19.b1 CHROMAT_FILE:
MSMg01no168_p19.b1 PHD_FILE: MSMg01no168_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:34 2005
(310 letters)
>mm_chr17_29759710_29760419
Length = 710
Score = 563 bits (291), Expect = e-165
Identities = 303/307 (98%)
Strand = Plus / Minus
Query: 4 ggaattcagtacactcttgtgtgatatccctgttttcattattttagaaactgggttata 63
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 342 ggaattcagtacactcttgtgtgatgtccctgttttcattattttagaaactgggttata 283
Query: 64 tctgtcttttggaaaaacccaatttggaattctgtacacacatgcccaggtgtcatcaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tctgtcttttggaaaaacccaatttggaattctgtacacacatgcccaggtgtcatcaat 223
Query: 124 tgtgaatatgcagcaatcacttccaccttgggctcatctttttctcaatggtgtcttttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tgtgaatatgcagcaatcacttccaccttgggctcatctttttctcaatggtgtcttttg 163
Query: 184 aggaacagaaatatcttaattttattatactacatccaatatttttaggcctcttccccc 243
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 162 aggaacagaaatatcttaattttattatactacatccaatatttttaggtctcttctccc 103
Query: 244 tggtatgggacagggtctcacagctgctgctctggtgattcgtctctgcctctcatcttg 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 102 tggtatgggacagggtctcacagctgctgctctggggattcgtctctgcctctcatcttg 43
Query: 304 tgatagg 310
|||||||
Sbjct: 42 tgatagg 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_p19.g1 MSMg01no168_p19.g1 CHROMAT_FILE:
MSMg01no168_p19.g1 PHD_FILE: MSMg01no168_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:34 2005
(282 letters)
>mm_chr17_29655845_29656526
Length = 682
Score = 499 bits (258), Expect = e-146
Identities = 280/300 (93%), Gaps = 20/300 (6%)
Strand = Plus / Plus
Query: 1 caggacggccagggctatagagagaaactctgtctcgaaaaaaccaacaaaaacaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caggacggccagggctatagagagaaactctgtctcgaaaaaaccaacaaaaacaaaaca 240
Query: 61 a--------------------caacaacaacaacaataccccctgagaagacaagctgtt 100
| |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaacaacaacaacaacaacaacaacaacaacaacaataccccctgagaagacaagctgtt 300
Query: 101 gagcagacctcgggtgtgcaccatcccagtggtggttcagtttgttttgcggtataatga 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagcagacctcgggtgtgcaccatcccagtggtggttcagtttgttttgcggtataatga 360
Query: 161 ccccagcccgaccgggggccatgagtccacggtgctgatggaggaacgcttgcggcggcc 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccccagcccgaccgggggccatgagtccacggtgctgatggaggaacgcttgcggcggcc 420
Query: 221 agctaagctcatgatcttggggtccctgtagagcgtgtagccgtgcttgaccacgaaggg 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agctaagctcatgatcttggggtccctgtagagcgtgtagccgtgcttgaccacgaaggg 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
