Query= MSMg01no172_d18.b1 MSMg01no172_d18.b1 CHROMAT_FILE:
MSMg01no172_d18.b1 PHD_FILE: MSMg01no172_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:39 2005
(614 letters)
>mm_chr17_85446206_85447219
Length = 1014
Score = 1050 bits (543), Expect = 0.0
Identities = 582/595 (97%)
Strand = Plus / Minus
Query: 20 atttgacttatttggcttcattaagagcatcatgcaattttagattttcttcaggcatac 79
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 attttacttatttggcttcattaagagcatcatgcaattttagattttcttcaggcatac 755
Query: 80 actgtactgctaagattcacggggacggccacacactgctgtaacttggtcaatgtaaca 139
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 754 aatgtactgctaagattcacggggatggccacacactgctgtaacttggtcaatgtaaca 695
Query: 140 tatcccgtgacacacaacacaactccaacattttggagtatgtgtggggactactgtcta 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tatcccgtgacacacaacacaactccaacattttggagtatgtgtggggactactgtcta 635
Query: 200 cctaaccagaggaactacggtaactacagaagagtgatcaaccagaggaatccggtaggt 259
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 634 cctgaccagaggaactacggtgactacagaagagtgatcaaccagaggaatccgggaggt 575
Query: 260 agcctgtgagaatcactagtgtagtgcctcaaggaatgtagcttagacaacgagtaggct 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 agcctgtgagaatcactagtgtagtgcctcaaggaatgtagcttagacaacgagtaggct 515
Query: 320 tggtttggagctccgtaaccctgagtcctgaggctcacctaatggaaatggcgaggcctc 379
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 514 tggtttggagctccgtaaccctgactcctgaggctcacctaatggaaatggtgaggcctc 455
Query: 380 ttttgcctgtttattgaaagactcagtgctaattcccttctgttcagactggtcttgatc 439
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 454 ttttgcctgtttattgaaagactcagtgctaattcccttctgttcagactggccttgatc 395
Query: 440 acctaggtaagtcccgggaaactgggactcagtgagcaaactctgtcactccattgtgtc 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acctaggtaagtcccgggaaactgggactcagtgagcaaactctgtcactccattgtgtc 335
Query: 500 cccaataccctcactgaagaaagatttgccatcgatccctggctctgtaaagaatcaggg 559
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 334 cccaataccctcactgaagaaagattcgccatcgatccctggctctgtaaagaaccaggg 275
Query: 560 aagggtcctccagatgcacacattataagggaaacacttccgaggacctcctgca 614
||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 274 aagggtcctccagatgcacacattagaagggaaacacttccaaggacctcctgca 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no172_d18.g1 MSMg01no172_d18.g1 CHROMAT_FILE:
MSMg01no172_d18.g1 PHD_FILE: MSMg01no172_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:39 2005
(290 letters)
>mm_chr17_85296312_85297003
Length = 692
Score = 518 bits (268), Expect = e-151
Identities = 284/290 (97%), Gaps = 2/290 (0%)
Strand = Plus / Plus
Query: 1 tgctgctctgccttccgttcaattagtctctgctcttgtttctctctgtcctctgtgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctgctctgccttccgttcaattagtctctgctcttgtttctctctgtcctctgtgctc 260
Query: 61 catgcagctggacagacagagaagcctcctgcgctccaccccatactcccaacagtgtca 120
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 261 catgcagctggacagacagagaagccttctgccctccaccccatactcccaacagtgtca 320
Query: 121 ggccttggcatctgtatgaggctgccatcctgtcccatgcagtcagacatgctagatggg 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtcttggcatctgtatgaggctgccatcctgtcccatgcagtcagacatgctagatggg 380
Query: 181 gcacacctgtagggagacacaggggaaagaaagggaacttgagggggg--tgttggggta 238
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 381 gcacacctgtagggagacacaggggaaagaaagggaacttggggggggggtgttggggta 440
Query: 239 cagcgttcccacattaggggtaggattctaggccgaaaggaactaactca 288
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcgttcccacattaggggtaggattctaggccgaaaggaactaactca 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 692
Length adjustment: 9
Effective length of query: 281
Effective length of database: 683
Effective search space: 191923
Effective search space used: 191923
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
