Query= MSMg01no176_l20.b1 MSMg01no176_l20.b1 CHROMAT_FILE:
MSMg01no176_l20.b1 PHD_FILE: MSMg01no176_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:52 2005
(331 letters)
>mm_chr17_36526755_36527485
Length = 731
Score = 563 bits (291), Expect = e-165
Identities = 321/331 (96%)
Strand = Plus / Minus
Query: 1 tgcccctgggcaatcattcacagtttgacaccacagaaggtagaggttgcaccactaggc 60
||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 531 tgcccctgggcaatccttcacagtttgacaccacagaaggtagaggtcccaccactaggc 472
Query: 61 accccccatgagtcagctctcagatgctgctgacactctagacatgtcttctgcaatctc 120
|| ||||| ||||||| |||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 471 acaccccaagagtcagttctcagatgctgctgacactctggacatgtcttttgcaatctc 412
Query: 121 attttgaaacatggcctgacctctataaggatcttcctgtcatcttgtgagcacacactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 attttgaaacatggcctgacctctataaggatcttcctgtcatcttgtgagcacacactt 352
Query: 181 aaactggatggaacccgtgtcaatgctctgtgcagactctgggtctgacaagatttctac 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaactgggtggaacccgtgtcaatgctctgtgcagactctgggtctgacaagatttctac 292
Query: 241 cacactgaatgctgcactgtctgatttaaagccacttcctttctttatatgcgatcctgc 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 291 cacactgaatgctgcactgtctgatttaaagccacttccttcctttatatgcgatcctgc 232
Query: 301 caggtgtcagcacatattccaatgctctgac 331
|||||||||||||||||||||||||||||||
Sbjct: 231 caggtgtcagcacatattccaatgctctgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_l20.g1 MSMg01no176_l20.g1 CHROMAT_FILE:
MSMg01no176_l20.g1 PHD_FILE: MSMg01no176_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:52 2005
(372 letters)
>mm_chr17_36374149_36374920
Length = 772
Score = 615 bits (318), Expect = e-180
Identities = 358/377 (94%), Gaps = 10/377 (2%)
Strand = Plus / Plus
Query: 1 taaactgagttccatgataccgggctctttgaggccccggcgggtccggaggnggcgatg 60
||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct: 201 taaactgagttccatgataccgggctccctgaggcccaggcgggtccggaggcggcgatg 260
Query: 61 agggaataccacagctagtgtgagcctgtggatggcgggtggtgaaactccgacgtcctc 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 agggaataccacagctagtgtgagcctgtggatggcgggcggtgaaactccgacgtcctc 320
Query: 121 ccgggactccaggacggtgctctggccaggaggggagcagggcttagggtttgggacccg 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaggactccaggacggtgctctggccaggaggggagcagggcttagggtttgggacccg 380
Query: 181 ggtggagaagggacagaaggttcagctggcgatgcaggggcggggcttccccagtggagc 240
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtggagaagagacggaaggttcagctggcgatgcaggggcggggcttccccagtggagc 440
Query: 241 cccactccacccacccgctcctccccgcagaggccaattccctcaggacaccgcagtcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccactccacccacccgctcctccccgcagaggccaattccctcaggacaccgcagtcac 500
Query: 301 cagctcaggactgtgtcttttt-----ctagaacgcctgccagccataggagaaacccgc 355
||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 501 cagctcaggactgtggc-----gggggctagaacgcctgccagccataggagaaacccgc 555
Query: 356 agagcgccatcaggcag 372
|||||||||||||||||
Sbjct: 556 agagcgccatcaggcag 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
