Query= MSMg01no176_p07.b1 MSMg01no176_p07.b1 CHROMAT_FILE:
MSMg01no176_p07.b1 PHD_FILE: MSMg01no176_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:21 2005
(636 letters)
>mm_chr17_71199626_71200661
Length = 1036
Score = 1199 bits (620), Expect = 0.0
Identities = 632/636 (99%)
Strand = Plus / Plus
Query: 1 tgccagggtctcctagaacatcaaccgcacagtcctgccccagaaacagcactagaaacc 60
||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||
Sbjct: 201 tgccagggtctcctagaacatcaaccgcaaagccctgccccagaaacggcactagaaacc 260
Query: 61 acgcggcgcctgggccgagcatggggtgtcaggaagacaatgaaacttggaggcgtacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgcggcgcctgggccgagcatggggtgtcaggaagacaatgaaacttggaggcgtacaa 320
Query: 121 acaaggcgctgagcgtggttcttgacaacgtgccaacagcgtggcgcggctcagcctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaggcgctgagcgtggttcttgacaacgtgccaacagcgtggcgcggctcagcctccc 380
Query: 181 cacaacagcccctcgggttgtgtctagaaggaaaagaacaccaactgccatcagagacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacaacagcccctcgggttgtgtctagaaggaaaagaacaccaactgccatcagagacac 440
Query: 241 agcctcaacaaagagaacagccaccaatccagccggggagccactggtccgaaaagtccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcctcaacaaagagaacagccaccaatccagccggggagccactggtccgaaaagtccc 500
Query: 301 atcaagtcagtgttctcccgatccgtcgcggcccgcacatgtcccgcactggtgccccgg 360
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 atcaagtcagtgttctcccgatccggcgcggcccgcacatgtcccgcactggtgccccgg 560
Query: 361 gcgctcacagcccgccgccaccttacccttcttgcttttcattctggaactcgagtccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcgctcacagcccgccgccaccttacccttcttgcttttcattctggaactcgagtccca 620
Query: 421 gtgagaggtgaagctggggtttctaggagccagcagccgtggagtggcgggagggtagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgagaggtgaagctggggtttctaggagccagcagccgtggagtggcgggagggtagtc 680
Query: 481 gatgatcctcctcctatactagtgctccggtaacttacaagagagtgttccaaccactat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatgatcctcctcctatactagtgctccggtaacttacaagagagtgttccaaccactat 740
Query: 541 tgctaaacaaggtgctccggtctcaggcgctggcttctgggttggaattcaagtgacact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgctaaacaaggtgctccggtctcaggcgctggcttctgggttggaattcaagtgacact 800
Query: 601 tgggcttcctccagtcgggatcttctggcagccagc 636
||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgggcttcctccagtcgggatcttctggcagccagc 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_p07.g1 MSMg01no176_p07.g1 CHROMAT_FILE:
MSMg01no176_p07.g1 PHD_FILE: MSMg01no176_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:21 2005
(380 letters)
>mm_chr17_71334679_71335458
Length = 780
Score = 640 bits (331), Expect = 0.0
Identities = 355/367 (96%), Gaps = 8/367 (2%)
Strand = Plus / Minus
Query: 16 ttaactttgctatcaacacctataaggcaatacccgggggtttgtcgttgttggtggttt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ttaactttgctatcaacacctataaggcaatacccgggggtttgtcgttgttggtggttt 721
Query: 76 ggtttggagacagggtctttatagccctggctgtccaggaagttaactctgcattccagg 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ggtttggagacagggtctttatagccctggctgtccaggaagttaactctgcattccagg 661
Query: 136 ctggccttgaacttaaagagctcttcctgcctctgcctccagagtgcaaggatcagagag 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ctggccttgaacttaaagagctcttcctgcctctgcctccagagtgcaaggatcagagag 601
Query: 196 gtgtgtgccaccacacctggctaataaattccagtctttaaaagccaggaatccccaagc 255
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 600 gtgtgtgccaccacacctggctaataaattccagtctttaaaaggcaggaatccccaagc 541
Query: 256 actttagtctcgcacggttgtcttcttccagagggatcgtgtccagtgtggctgactcac 315
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 540 agtttagtctcgcacggttgtcttcttccagagggatcatgtccagtgtggctgactcac 481
Query: 316 acaggtaacctgttg----tttttggcttttgcaggaggcctccgttctctctgctatct 371
||||||| ||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 480 acaggtagcctgttgccact----ggcttttgcaggaggcctccgttctctctgctatct 425
Query: 372 ggtgcta 378
|||||||
Sbjct: 424 ggtgcta 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
