Query= MSMg01no180_a06.b1 MSMg01no180_a06.b1 CHROMAT_FILE:
MSMg01no180_a06.b1 PHD_FILE: MSMg01no180_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:10 2005
(633 letters)
>mm_chr17_42707898_42708932
Length = 1035
Score = 1187 bits (614), Expect = 0.0
Identities = 627/632 (99%), Gaps = 2/632 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagtaagacaacaccagttagcatcaatagcctaacatctcaagctactagtgt 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ggaattcagtaagacaacatcagttagcatcaatagcctaacatctcaagctactagtgt 776
Query: 64 attctaccaagaaaactctacattaccactgtggttactatgcacttgaacattttgctt 123
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 775 attctaccaagaaaactctatattaccactgtggttactatgcacttgaacattttgctt 716
Query: 124 tttaaagattgtataactttcaacatgcatattcacaggtcataataaggtgtgggatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tttaaagattgtataactttcaacatgcatattcacaggtcataataaggtgtgggatat 656
Query: 184 attctgaaaatcattctactgcacagattggaattaaaacaacacatgtgtgtatctaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 attctgaaaatcattctactgcacagattggaattaaaacaacacatgtgtgtatctaaa 596
Query: 244 tgacctttctcagttactttaaatatctgttccttatctccaatctccagtcatcatatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgacctttctcagttactttaaatatctgttccttatctccaatctccagtcatcatatc 536
Query: 304 tcaagtgcattatgagatttggagtagacagatgtatatcacataaaatataac--agag 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 535 tcaagtgcattatgagatttggagtagacagatgtatatcacataaaatataactgagag 476
Query: 362 aaaaatcactctatattgtacaaggacttcattgattctagttgattttggtttcaatgt 421
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aaaaatcactctatgttgtacaaggacttcattgattctagttgattttggtttcaatgt 416
Query: 422 tggtgaactctacctagataaatagcacatgtactcatttatcccagctaggaggtgttt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tggtgaactctacctagataaatagcacatgtactcatttatcccagctaggaggtgttt 356
Query: 482 gcaatacatagtgacctgaaaatataaaagaagggggctgtgttttcaatcttttaggag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gcaatacatagtgacctgaaaatataaaagaagggggctgtgttttcaatcttttaggag 296
Query: 542 ttgaatgtgagcatcagaaaatactgccaactctctgtacatctatatatatcatctata 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttgaatgtgagcatcagaaaatactgccaactctctgtacatctatatatatcatctata 236
Query: 602 tctctatggctgtattacctacatctatgtca 633
||||||||||||||||||||||||||||||||
Sbjct: 235 tctctatggctgtattacctacatctatgtca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1035
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1025
Effective search space: 638575
Effective search space used: 638575
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_a06.g1 MSMg01no180_a06.g1 CHROMAT_FILE:
MSMg01no180_a06.g1 PHD_FILE: MSMg01no180_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:10 2005
(508 letters)
>mm_chr17_42547102_42548009
Length = 908
Score = 951 bits (492), Expect = 0.0
Identities = 504/508 (99%)
Strand = Plus / Plus
Query: 1 catcactttgcttggcttccttatgagttccagtaaggcttctgatgagaccctgttcct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 201 catcactttgcttggcttccttatgagttccagtaaggcttctgaagagactctgttcct 260
Query: 61 gtccatgtcacagcttcttcatgctctgatgatttgggtttcaagcatcaagactttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtccatgtcacagcttcttcatgctctgatgatttgggtttcaagcatcaagactttctt 320
Query: 121 caaagctcctgggattgcctgcgtgccaggtgtttggacaccacttgctaagttctgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaagctcctgggattgcctgcgtgccaggtgtttggacaccacttgctaagttctgtgc 380
Query: 181 acagacctagtggacttcatggtggattcgtctggtagatattgttgtacctcttgagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagacctagtggacttcatggtggattcgtctggtagatattgttgtacctcttgagcc 440
Query: 241 agtcattttctctagggcactgctatttgagcctgagcttggaattggaaacttcagtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcattttctctagggcactgctatttgagcctgagcttggaattggaaacttcagtgc 500
Query: 301 tttgggtggtcacttgatggtttgttaaaaacaaaactggagtcaggactcatgactgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgggtggtcacttgatggtttgttaaaaacaaaactggagtcaggactcatgactgaa 560
Query: 361 aatttgcttgattagtttttatgtgttgttagtgtggcatgtcctgaggtacaggttaag 420
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatttgcatgatcagtttttatgtgttgttagtgtggcatgtcctgaggtacaggttaag 620
Query: 421 aagtgcttgtcttgaaaaaatccttctctttatgccctcactgactactgcttcccctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtgcttgtcttgaaaaaatccttctctttatgccctcactgactactgcttcccctac 680
Query: 481 tttacatattcttctttgctaccaattc 508
||||||||||||||||||||||||||||
Sbjct: 681 tttacatattcttctttgctaccaattc 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
