Query= MSMg01no183_d11.b1 MSMg01no183_d11.b1 CHROMAT_FILE:
MSMg01no183_d11.b1 PHD_FILE: MSMg01no183_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:10 2005
(662 letters)
>mm_chr17_10840263_10841324
Length = 1062
Score = 1137 bits (588), Expect = 0.0
Identities = 641/660 (97%), Gaps = 7/660 (1%)
Strand = Plus / Minus
Query: 5 gaattctattagaaataccaaaggaattttgcaaggtagataaatatgcaaaataaatac 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 gaattctattagaagtaccaaaggaattttgcaaggtagataaatatgcaaaataaatac 937
Query: 65 atacaatgaaatttgctcttattgtagtttgcttttaatgtattttttaataacaagctg 124
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 atacaatgaaatttg-ttttattgtagtttgcttttaatgtattttttaataacaagctg 878
Query: 125 aaactaatagaaaggtggacaggtggttcagcagttaaaaacattggctgctttgggaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aaactaatagaaaggtggacaggtggttcagcagttaaaaacattggctgctttgggaga 818
Query: 185 ggacctaggcttggttcccagtagccacgtggcgactcacaacccagttcccagggatgc 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 817 ggacctaggcttggttcccagtagccacatggcgactcacaacccagttcccagggatgc 758
Query: 245 caggctctcttctgacttcactgggtaccagcaagcattcatgtgccacacagacataca 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 caggccctcttctgacttcactgggtaccagcaagcattcatgtgccacacagacataca 698
Query: 305 accaggtaaaacattcacacagataaaaataattatgttaaaatttaggaagataacaca 364
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 697 accaggtaaaacattcacacagataaaaataattatgttacaatttaggaagatagcaca 638
Query: 365 gaaagaataaaactgttcaactcttagtaaaagttagcaagaaatgtgtctgactccagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gaaagaataaaactgttcaactcttagtaaaagttagcaagaaatgtgtctgactccagt 578
Query: 425 aaactacaaaacctaatgacatttgctattgacaagttgactgcttcttacacgcgttcg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aaactacaaaacctaatgacatttgctattgacaagttgactgcttcttacacgcgttcg 518
Query: 485 cgcgaccggccaggaaagacgcaacaaaccggaatcttctgcggcaaagctttatcgctt 544
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 517 cgagaccggccaggaaagacgcaacaaaccgaaatcttctgcggcaaagctttatcgctt 458
Query: 545 acatcttcaggagccagagagcaagagagcaagagagcaagagagcaagagagca--aga 602
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 457 acatcttcaggagccagagagcaagagagcaagagagcaagagagca--agagcaagaga 400
Query: 603 gagcaagagagcaagagagcaagagagcaagagagcaagagagcaagagagcaagaaagc 662
||| || ||| ||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 399 gagaaaaagaacaaga-a-caagaaagcaagagagcaagagagcaagagagcaagaaagc 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 20
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_d11.g1 MSMg01no183_d11.g1 CHROMAT_FILE:
MSMg01no183_d11.g1 PHD_FILE: MSMg01no183_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:10 2005
(146 letters)
>mm_chr17_10698045_10698589
Length = 545
Score = 257 bits (133), Expect = 2e-73
Identities = 142/145 (97%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 1 cttaggagccatgggaaggggcttttaaggaaggaaagatagagccgacatggtataaag 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 cttaggagccatgggaaggggcttttaaggaaggaaagatagagt-gacatggtataaag 259
Query: 61 gcttaaagggaaataatgggacaggaaggttaaactggggtgggagtactgagggtgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 260 gcttaaagggaaataatgggacaggaaggttaaactggggtgggagtactgagagtgggg 319
Query: 121 agaggaaaatatggggagggataag 145
|||||||||||||||||||||||||
Sbjct: 320 agaggaaaatatggggagggataag 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 545
Length adjustment: 8
Effective length of query: 138
Effective length of database: 537
Effective search space: 74106
Effective search space used: 74106
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
