Query= MSMg01no185_o15.b1 MSMg01no185_o15.b1 CHROMAT_FILE:
MSMg01no185_o15.b1 PHD_FILE: MSMg01no185_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:44 2005
(657 letters)
>mm_chr17_50951785_50952842
Length = 1058
Score = 1236 bits (639), Expect = 0.0
Identities = 651/657 (99%), Gaps = 5/657 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacaatacca---ctaacatacaggaaaatgtttaagaaaaaaatttggttaac 60
||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacaaga--aaagctaacatacaggaaaatgtttaagaaaaaaatttggttaac 261
Query: 61 ttggcagcatttatctatcattgctaacattgttttctagagtaaactttgaaattgcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttggcagcatttatctatcattgctaacattgttttctagagtaaactttgaaattgcat 321
Query: 121 tctaatttgaaatggttttggtttgacaagttaactcttgagacatctaagtacagtatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tctaatttgaaatggttttggtttgacaagttaactcttgagacatctaagtacagtatt 381
Query: 181 atgaaagaacaaaactgttcatcaaccctttatgccaatgttaatttcttttaaaagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atgaaagaacaaaactgttcatcaaccctttatgccaatgttaatttcttttaaaagtac 441
Query: 241 gattttaatggttttttattcctacagtgacccttaagatttctatgtatgcaatcactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gattttaatggttttttattcctacagtgacccttaagatttctatgtatgcaatcactg 501
Query: 301 atgcacacacaagatgcatttataagcttattttgtagtttcaaagtcaactgggaaacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgcacacacaagatgcatttataagcttattttgtagtttcaaagtcaactgggaaacg 561
Query: 361 caattttaattttgttactgaaataatttaaaaatacatcatagaaatgcctcttttcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 caattttaattttgttactgaaataatttaaaaatacatcatagaaatgcctcttttcat 621
Query: 421 tcaacagtaaagatccagaaagagattatatcaagtagaaactattcatgtttattagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tcaacagtaaagatccagaaagagattatatcaagtagaaactattcatgtttattagtg 681
Query: 481 ttagaaatatgaagctggtaacttcaaaatgtattcttttgatatatttaaaaatttcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ttagaaatatgaagctggtaacttcaaaatgtattcttttgatatatttaaaaatttcat 741
Query: 541 agtatgtattcattgtacacggtactgttataaaagaacattttcatgcaagtatatgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agtatgtattcattgtacacggtactgttataaaagaacattttcatgcaagtatatgtt 801
Query: 601 atatgttgaacatatcctgccaatactgccttctttttcccttcccagccttttgtg 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 atatgttgaacatatcctgccaatactgccttctttttcccttcccagccttttgtg 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1058
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1048
Effective search space: 678056
Effective search space used: 678056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_o15.g1 MSMg01no185_o15.g1 CHROMAT_FILE:
MSMg01no185_o15.g1 PHD_FILE: MSMg01no185_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:44 2005
(325 letters)
>mm_chr17_51109402_51110126
Length = 725
Score = 505 bits (261), Expect = e-147
Identities = 298/325 (91%), Gaps = 23/325 (7%)
Strand = Plus / Minus
Query: 1 tcatggtaactaataattgtgttccattatttaagaagcacataacttgaccttaaaagc 60
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tcatggtaactaataattgtgttccattatttaagaagcaca------------------ 526
Query: 61 caacttaacttgaccttaaaagcctgttgcccttgacaggataggatggcagtcctgcca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 -----taacttgaccttaaaagcctgttgcccttgacaggataggatggcagtcctgcca 471
Query: 121 ctagcaacagttaaccttctgtagcttcttcacccttatgaataggaactcattatggag 180
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 470 ctagccacagttaaccttctgtagcttcttcaccctcgtgaataggaactcattatggag 411
Query: 181 gggactggaaggcactaattcatacttttccctattcaaaattactggtgttttcaggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gggactggaaggcactaattcatacttttccctattcaaaattactggtgttttcaggtc 351
Query: 241 ataaaagtgcttgtttttgatttgtttgttagaaattaagtttaatttgggattcgaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ataaaagtgcttgtttttgatttgtttgttagaaattaagtttaatttgggattcgaagt 291
Query: 301 gaagatgtgcttccttatctcatct 325
|||||| ||||||||||||||||||
Sbjct: 290 gaagatatgcttccttatctcatct 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
