Query= MSMg01no186_m12.b1 MSMg01no186_m12.b1 CHROMAT_FILE:
MSMg01no186_m12.b1 PHD_FILE: MSMg01no186_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:53 2005
(316 letters)
>mm_chr17_68478967_68479682
Length = 716
Score = 551 bits (285), Expect = e-161
Identities = 306/313 (97%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 4 ggaattcgctcatcttgggacaaaccagatcttggggtacagagtttagcatttgaatac 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcgctcatcttggggcaaaccagatcttggggtacagagtttagcatttgaatac 264
Query: 64 ataacagccaacccccccacactcaacatcctctcttttggtgagaggagaaagaggaat 123
||||||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||
Sbjct: 265 ataacagccaa-ccccccacacttaacatcctctcttttggtaagaggagaaagaagaat 323
Query: 124 cagtgatggtctgtgaggcagggagatgcagtgtcccttagcttgtcaggagacaggttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagtgatggtctgtgaggcagggagatgcagtgtcccttagcttgtcaggagacaggttg 383
Query: 184 catttgtagatagatggaaatagaatgttgaaacagctggtgggatcaggttcgccttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catttgtagatagatggaaatagaatgttgaaacagctggtgggatcaggttcgccttgg 443
Query: 244 tgcttcctgctctctcgtctactgtggttgcacaccatagcaattccgtaagatccattc 303
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 tgcttcctgctctctcatctactgtggttgcacaccacagcaattccgtaagatccattc 503
Query: 304 tactgaatgtttg 316
|||||||||||||
Sbjct: 504 tactgaatgtttg 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_m12.g1 MSMg01no186_m12.g1 CHROMAT_FILE:
MSMg01no186_m12.g1 PHD_FILE: MSMg01no186_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:53 2005
(285 letters)
>mm_chr17_68628451_68629137
Length = 687
Score = 480 bits (248), Expect = e-140
Identities = 275/286 (96%), Gaps = 6/286 (2%)
Strand = Plus / Minus
Query: 1 actgttgtacttgagaaaggaaatagactcttggtttct----atcaacagaaagtcagt 56
|||| ||||||| ||||||||||||||||||||| |||| ||| |||||||||||||
Sbjct: 484 actgctgtacttaagaaaggaaatagactcttgg-ttctaaccatccacagaaagtcagt 426
Query: 57 gaatgaactgcaggctttgtgtatcaagatggcacctctaataattcacctttatggtgg 116
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 425 gaatgaactgcaggctttgtgtatcaagatggcatctctaataattcacctttatggtgg 366
Query: 117 taatgaccaggccaatagggtgtaatgacatgaaattaaagaatgttctctgccataaag 176
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 365 taacgaccaggccaatagggtgtaatgacatgaaattaaagaatgttctctg-cataaag 307
Query: 177 taaaagaaaaaagacccttgaattcctctttgatatctgactataatagtaacaaaatgt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 taaaagaaaaaagacccttgaattcctctttgatatctgactataatagtaacaaaatgt 247
Query: 237 agggctgaaggtcgggtctcatgtcttcaatcaactcaactctttg 282
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 agggctgaaggtcgggtctcatgtcttcaatcaactcaactctttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 687
Length adjustment: 9
Effective length of query: 276
Effective length of database: 678
Effective search space: 187128
Effective search space used: 187128
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
