TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAAATAGACAGGACCAGAAAAGAAATTCCTCCTAACACATAATAAT
CAGAACAACAAATGCACCAAATAAAGATAGAATATTAAAAGCAGTTAGGG
AAAAAGTCAAGTAACATATAAAGGTAGGCCTATCAGAATTACACCAGATT
TTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGTTATACAG
ACACTAAGAGAACACAAATGCCAGCCCAGGTTACTATACCCAGCCAAACT
TTCAATTACCATAGATGGAGAAACCAACGTATTCTACAACAAAACCTAAT
TCACACATTATCTTTCCATGAATCCAGCCCTTCAAAGGATAATAACAGAA
AAAAAAAACAATACAAGGACGGAAACCATGTCCTAGAAAAAGCAAGAAAG
TAATGCTTCAACAAACCTAAAAAAAAGACAGCCACAAGAACAGAATGCCA
ACTCTAACAACAAAAATAATAGAAAGCAACAATTACTTTTCCTTAATATC
TCTTAATATCAATGGACTCAATTCCCCAATAAAAAGACATAGGCTAACAG
ACTGGCTACACAAACAGGACCCAACACTTTGCTGCTTACAGGAAACCCAT
CCCAGGAAAAAAGACAGACACTACCTCAGAATGAAAGGCTGGAAAACAAT
TTTCGAAGCAAATGGTCTGAAGAAAC

TCTTCCTNCCCTTCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGGGACTGC
CTACTGGGAAAGGTATTGTTTCTTCTCTCTTAAATTGCGTATAGTCTGGA
TATTGGACAATTCATACTTCTAAGAGTTCAGTTAACAGCAAAGTTATTTA
TTAAGGCAAACACTTGACATCCCAGAGCCATTGTTGAATAAATTATTTAG
AATTTGGAATTTAGCCAGTCAAAATAAGACTAGGCTTGTCTGCAGAATTC
TTTCTGGCCTGTGTTATTTTATTGACACTCATTTAGTAAGAATTAACCTA
ATGGATACAGTCAAACTGCAAGCCAAAAATGACTGTTATGGTGATACATA
TTCTAAAAGAAAAACATACTAAATCACTAGGATTATTATATGAGTATAAA
AAGGGTAAATACTGAGAATTCATTGTCCTTGTGCATTATGTGTTTAAAGT
ACTGAATATTAATATACTTATTTTCTACATTCAGACCACGCAAAAAAACA
CAAACCTCTTAATCTTTACATACCAATTCTCTTCCACCTCATATGAATTA
TGTACATTTTATTATGTCCAATTATTAAGTTGTAAATAATGTAAATAGTC
AAATTATAGTAAGTGGATGGTCATGTAAGCAAAGGGCAATATAAATGGAA
TATAATTGACATTTCAATTCATCTATGTTTTAGAAAGTTGCCTTTTCN

Query= MSMg01no187_f04.g1 MSMg01no187_f04.g1 CHROMAT_FILE:
MSMg01no187_f04.g1 PHD_FILE: MSMg01no187_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:36 2005
         (651 letters)



>mm_chr17_42187232_42188282
          Length = 1051

 Score = 1220 bits (631), Expect = 0.0
 Identities = 646/651 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgggactgcctactgggaaaggtattgtttcttctctcttaaattgcgtatagtctgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggactgcctactgggaaaggtattgtttcttctctcttaaattgcgtatagtctgga 260

                                                                       
Query: 61  tattggacaattcatacttctaagagttcagttaacagcaaagttatttattaaggcaaa 120
           ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 tattggacaattcatgcttctaagagttcagttaacagcaaagttgtttattaaggcaaa 320

                                                                       
Query: 121 cacttgacatcccagagccattgttgaataaattatttagaatttggaatttagccagtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacttgacatcccagagccattgttgaataaattatttagaatttggaatttagccagtc 380

                                                                       
Query: 181 aaaataagactaggcttgtctgcagaattctttctggcctgtgttattttattgacactc 240
           |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 aaaataagacaaggcttgtctgcagaattctttccggcctgtgttattttattgacactc 440

                                                                       
Query: 241 atttagtaagaattaacctaatggatacagtcaaactgcaagccaaaaatgactgttatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttagtaagaattaacctaatggatacagtcaaactgcaagccaaaaatgactgttatg 500

                                                                       
Query: 301 gtgatacatattctaaaagaaaaacatactaaatcactaggattattatatgagtataaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgatacatattctaaaagaaaaacatactaaatcactaggattattatatgagtataaa 560

                                                                       
Query: 361 aagggtaaatactgagaattcattgtccttgtgcattatgtgtttaaagtactgaatatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagggtaaatactgagaattcattgtccttgtgcattatgtgtttaaagtactgaatatt 620

                                                                       
Query: 421 aatatacttattttctacattcagaccacgcaaaaaaacacaaacctcttaatctttaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatatacttattttctacattcagaccacgcaaaaaaacacaaacctcttaatctttaca 680

                                                                       
Query: 481 taccaattctcttccacctcatatgaattatgtacattttattatgtccaattattaagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taccaattctcttccacctcatatgaattatgtacattttattatgtccaattattaagt 740

                                                                       
Query: 541 tgtaaataatgtaaatagtcaaattatagtaagtggatggtcatgtaagcaaagggcaat 600
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 741 tgtaaataatgtaaatagtcaaattatagtaattggatggtcatgtaagcaaagggcaat 800

                                                              
Query: 601 ataaatggaatataattgacatttcaattcatctatgttttagaaagttgc 651
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ataaatggaatataattgacatttcaattcatctatgttttagaaagttgc 851


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)