MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-188C01
Chromosome	17 (Build37)
Map Location	30,148,645 - 30,255,524
singlet/doublet	doublet
Overlap gene	Zfand3
Upstream gene	Sfrs3, LOC100042815, Cdkn1a, 9830134C10Rik, LOC100043341, Cpne5, Ppil1, BC004004, LOC100043348, Pi16, Mtch1, Fgd2, Pim1, 4933413N12Rik, Tbc1d22b, Rnf8, 1300018I05Rik, Mdga1, LOC100042885, LOC100042888
Downstream gene	Btbd9, EG623169, Glo1, LOC666942, 1700097N02Rik, Dnahc8, Glp1r, Umodl1, Abcg1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sfrs3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20383 MGI:98285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042815 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042815
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Cdkn1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12575 MGI:104556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9830134C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:442827 MGI:3045302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043341 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 255 ESTs, 3 Proteins

name	Cpne5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240058 MGI:2385908
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppil1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68816 MGI:1916066
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC004004 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80748 MGI:2136782
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043348 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043348
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1103 ESTs, 9 Proteins

name	Pi16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74116 MGI:1921366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtch1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56462 MGI:1929261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fgd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26382 MGI:1347084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pim1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18712 MGI:97584
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933413N12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71138 MGI:1918388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 2 Proteins

name	Tbc1d22b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381085 MGI:2681867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58230 MGI:1929069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1300018I05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74157 MGI:1921407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mdga1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74762 MGI:1922012
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042885 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042885
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Zfand3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21769 MGI:1096572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btbd9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224671 MGI:1916625
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG623169 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623169 MGI:3645740
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 947 ESTs, 9 Proteins

name	Glo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109801 MGI:95742
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666942 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	1700097N02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67522 MGI:1914772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Dnahc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13417 MGI:107714
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glp1r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14652 MGI:99571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Umodl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52020 MGI:1929785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11307 MGI:107704
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfrs3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803005 GeneID:20383 MGI:98285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 3 (SRp20) transcript_id : NM_013663.4

name	LOC100042815 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268644 GeneID:100042815
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100042815 transcript_id : XM_001478871.1

name	Cdkn1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368234 GeneID:12575 MGI:104556
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase inhibitor 1A (P21) transcript_id : NM_007669.3

name	9830134C10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381743 GeneID:442827 MGI:3045302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9830134C10 gene transcript_id : NM_001002786.2

name	LOC100043341 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268717 GeneID:100043341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 255 ESTs, 3 Proteins product : similar to ribosomal protein L35a transcript_id : XM_001480264.1

name	Cpne5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346610 GeneID:240058 MGI:2385908
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : copine V transcript_id : NM_153166.1

name	Ppil1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361575 GeneID:68816 MGI:1916066
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase (cyclophilin)-like 1 transcript_id : NM_026845.2

name	BC004004 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254143 GeneID:80748 MGI:2136782
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC004004 transcript_id : NM_030561.2

name	LOC100043348 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268719 GeneID:100043348
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1103 ESTs, 9 Proteins product : similar to ribosomal protein L21 transcript_id : XM_001480280.1

name	Pi16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089319 GeneID:74116 MGI:1921366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidase inhibitor 16 transcript_id : NM_023734.3

name	Mtch1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130562 GeneID:56462 MGI:1929261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial carrier homolog 1 (C. elegans) transcript_id : NM_019880.3

name	Fgd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803019 GeneID:26382 MGI:1347084
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FYVE, RhoGEF and PH domain containing 2 transcript_id : NM_013710.3

name	Pim1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254619 GeneID:18712 MGI:97584
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proviral integration site 1 transcript_id : NM_008842.2

name	Tbc1d22b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38348531 GeneID:381085 MGI:2681867
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 22B transcript_id : NM_198647.1

name	Rnf8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956111 GeneID:58230 MGI:1929069
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 8 transcript_id : NM_021419.1

name	1300018I05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802017 GeneID:74157 MGI:1921407
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1300018I05 gene transcript_id : NM_028791.4

name	Mdga1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487208 GeneID:74762 MGI:1922012
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAM domain containing glycosylphosphatidylinositol anchor 1 transcript_id : NM_001081160.1

name	LOC100042888 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268648 GeneID:100042888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100042888 transcript_id : XM_001478998.1

name	Zfand3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54020733 GeneID:21769 MGI:1096572
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, AN1-type domain 3 transcript_id : NM_148926.2

name	Btbd9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27819603 GeneID:224671 MGI:1916625
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTB (POZ) domain containing 9 transcript_id : NM_172618.1

name	EG623169 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401858 GeneID:623169 MGI:3645740
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 946 ESTs, 9 Proteins product : predicted gene, EG623169 transcript_id : XM_892956.2

name	Glo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981281 GeneID:109801 MGI:95742
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glyoxalase 1 transcript_id : NM_025374.2

name	1700097N02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268650 GeneID:67522 MGI:1914772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : RIKEN cDNA 1700097N02 gene transcript_id : XM_001479022.1

name	Dnahc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384921 GeneID:13417 MGI:107714
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein, axonemal, heavy chain 8 transcript_id : NM_013811.2

name	Glp1r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111378378 GeneID:14652 MGI:99571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucagon-like peptide 1 receptor transcript_id : NM_021332.2

name	Umodl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115270978 GeneID:52020 MGI:1929785
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uromodulin-like 1 transcript_id : NM_177465.4

name	Abcg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6752939 GeneID:11307 MGI:107704
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family G (WHITE), member 1 transcript_id : NM_009593.1

name	Sfrs3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8567402 CCDS:CCDS28590.1 GeneID:20383 MGI:98285
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence ISS] [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0006376 - mRNA splice site selection [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : splicing factor, arginine/serine-rich 3 (SRp20) protein_id : NP_038691.1

name	LOC100042815 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268645 GeneID:100042815
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478921.1

name	Cdkn1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671726 CCDS:CCDS28591.1 GeneID:12575 MGI:104556
definition	GO_component : GO:0000307 - cyclin-dependent protein kinase holoenzyme complex [Evidence IPI]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0030332 - cyclin binding [Evidence IPI]; GO:0004861 - cyclin-dependent protein kinase inhibitor activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004860 - protein kinase inhibitor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045736 - negative regulation of cyclin-dependent protein kinase activity [Evidence IDA]; GO:0030890 - positive regulation of B cell proliferation [Evidence IGI]; GO:0043071 - positive regulation of non-apoptotic programmed cell death [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IMP]; GO:0009411 - response to UV [Evidence IMP] codon_start : 1 product : cyclin-dependent kinase inhibitor 1A (P21) protein_id : NP_031695.1

name	9830134C10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50582589 GeneID:442827 MGI:3045302
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : hypothetical protein LOC442827 protein_id : NP_001002786.1

name	LOC100043341 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268718 GeneID:100043341
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480314.1

name	Cpne5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346611 CCDS:CCDS28592.1 GeneID:240058 MGI:2385908
definition	codon_start : 1 note : copine 5 product : copine V protein_id : NP_694806.1

name	Ppil1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312784 CCDS:CCDS28593.1 GeneID:68816 MGI:1916066
definition	GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : peptidylprolyl isomerase-like 1 protein_id : NP_081121.1

name	BC004004 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254144 CCDS:CCDS28594.1 GeneID:80748 MGI:2136782
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GrailEXP prediction product : cDNA sequence BC004004 protein_id : NP_085038.2

name	LOC100043348 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268720 GeneID:100043348
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480330.1

name	Pi16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089320 CCDS:28595.1 GeneID:74116 MGI:1921366
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 note : cysteine-rich protease inhibitor product : protease inhibitor 16 protein_id : NP_076223.3

name	Mtch1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9845273 CCDS:CCDS28596.1 GeneID:56462 MGI:1929261
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : mitochondrial carrier-like protein 1 product : mitochondrial carrier homolog 1 protein_id : NP_063933.1

name	Fgd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861174 GeneID:26382 MGI:1347084
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : faciogenital dysplasia homolog 2; Fgd1 family, member 2; Fgd2-like protein product : FYVE, RhoGEF and PH domain containing 2 protein_id : NP_038738.2

name	Pim1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254620 GeneID:18712 MGI:97584
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IDA] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IDA] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence ISS]; GO:0043066 - negative regulation of apoptosis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] [Evidence IEA] codon_start : 1 product : proviral integration site 1 protein_id : NP_032868.2

name	Tbc1d22b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348532 CCDS:CCDS28597.1 GeneID:381085 MGI:2681867
definition	codon_start : 1 product : TBC1 domain family, member 22B protein_id : NP_941049.1

name	Rnf8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956112 GeneID:58230 MGI:1929069
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : ActA binding protein 2 product : ring finger protein 8 protein_id : NP_067394.1

name	1300018I05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311939 GeneID:74157 MGI:1921407
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0051301 - cell division [Evidence IEA] codon_start : 1 product : hypothetical protein LOC74157 protein_id : NP_083067.1

name	Mdga1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487209 GeneID:74762 MGI:1922012
definition	GO_component : GO:0045121 - lipid raft [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016163 - nitrogenase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0009399 - nitrogen fixation [Evidence IEA] codon_start : 1 product : MAM domain containing glycosylphosphatidylinositol anchor 1 protein_id : NP_001074629.1

name	LOC100042888 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268649 GeneID:100042888
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479048.1

name	Zfand3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507321 CCDS:CCDS28598.1 GeneID:21769 MGI:1096572
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, AN1-type domain 3 protein_id : NP_683728.1

name	Btbd9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27819604 CCDS:CCDS28599.1 GeneID:224671 MGI:1916625
definition	GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 product : BTB (POZ) domain containing 9 protein_id : NP_766206.1

name	EG623169 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82992678 GeneID:623169 MGI:3645740
definition	codon_start : 1 product : similar to ribosomal protein S17 protein_id : XP_898049.1

name	Glo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981282 CCDS:CCDS28600.1 GeneID:109801 MGI:95742
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0004462 - lactoylglutathione lyase activity [Evidence ISS] [Evidence IDA] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS] codon_start : 1 exception : mismatches in translation note : glyoxalase 1 complex; glyoxalase 1 regulatory; glyoxalase 1 structural product : glyoxalase 1 protein_id : NP_079650.2

name	1700097N02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268651 GeneID:67522 MGI:1914772
definition	codon_start : 1 product : hypothetical protein LOC67522 protein_id : XP_001479072.1

name	Dnahc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328061 GeneID:13417 MGI:107714
definition	GO_component : GO:0005858 - axonemal dynein complex [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation function : ATPase note : dynein, axon, heavy chain 8; axonemal dynein heavy chain 8 Dnahc8; region surrounding P-loop 1 product : dynein, axonemal, heavy chain 8 protein_id : NP_038839.1

name	Glp1r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111378379 GeneID:14652 MGI:99571
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004967 - glucagon receptor activity [Evidence IEA]; GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007611 - learning and/or memory [Evidence IMP]; GO:0007218 - neuropeptide signaling pathway [Evidence TAS]; GO:0008016 - regulation of heart contraction [Evidence IMP]; GO:0006950 - response to stress [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : glucagon-like peptide 1 receptor protein_id : NP_067307.2

name	Umodl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776549 GeneID:52020 MGI:1929785
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : olfactorin product : uromodulin-like 1 protein_id : NP_803416.2

name	Abcg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6752940 CCDS:CCDS28602.1 GeneID:11307 MGI:107704
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015646 - permease activity [Evidence IEA] GO_process : GO:0030301 - cholesterol transport [Evidence IDA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATP-binding cassette 8 product : ATP-binding cassette, subfamily G, member 1 protein_id : NP_033723.1

name	LOC100042885 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042885
definition	number : 1 pseudo : _no_value

name	4933413N12Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94401861 GeneID:71138 MGI:1918388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : RIKEN cDNA 4933413N12 gene transcript_id : XR_001594.1

name	LOC666942 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268723 GeneID:666942
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to 40S ribosomal protein S13 pseudo : _no_value transcript_id : XR_034644.1

clone name	MSMg01-522E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088D23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-322J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025B04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-188C01.T7 (MSMg01no188_c01.b1)	MSMg01-188C01.TJ (MSMg01no188_c01.g1)
ACC	AG379247	AG379248
length	873	726
length of high quality (start - end)	207 (58 - 264)	284 (58 - 341)
definition	CHROMAT_FILE: MSMg01no188_c01.b1 PHD_FILE: MSMg01no188_c01.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:03:40 2005	CHROMAT_FILE: MSMg01no188_c01.g1 PHD_FILE: MSMg01no188_c01.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:03:40 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(30,148,645 - 30,148,845)	(30,255,241 - 30,255,524)
sequence	CCTTTNCCCCTTATCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXCGCGGAATTCTTCTGTCATATATTGCATCTCCTTTTTTATTTT ATTTAGTTGTTCATGTTCTCAGTGTTTATTTTCCTGGAGCATATTTACAA TCATTCTTTGGAATTCTCTGTCTGAGATTCAATTCCCTCCAACTAGATGC CATTACAGTGAAATTAGTTTTAAGGAGTTATGTTGTTTTGGATTTTTGTG ATTATGTTCCTGCGTTATTTCACATCTGGCGTTATTTCTTTCACCGATTA CTTATTATTGTTATTTATTATCTTTCGCCCTCTTTTTTTGTTTCTTCCCA TGTATTAATACGTACGCGAACCCAGATTTTTTTTTTTTTCCCCCCCCCCC CCCCCAAAAAATTATTAAACCTACTTTACTTTCCCTTTCCTCCCCCCCCT AAATAAAAAAAAAAAAAAATCTTCTTGTCGCTCTTATTCTCCTTCTACCA TCTTCCCCTCTCCATTTTCTTCCGCCCATTTCACACCCCTTCCTTATCAC CCTCTTTTCCGAATTCTTCCTTTCTTGCTACTATTCACTCCCTCTTTCCT AACCATTACATCCTTTATTCGCTTTCCCCCCTTTTTTTTACTCTCCCCCC TCTTCCCCATTAGAACCCATATCTTATATTTCACCTTGCCACCCCGATTT CCACCGTCTTACGCTAAACTCCCATTCCCTTATTCCCTTACCCTTTTTCC TCCCCACCTACTCCATTCCTACTTACCGTACCAATNCTCCACCATTACAC CTCTTCCCCGCCTACCTTTACCCATTTTCCAACCCCCATTCTTTCGCCGT TCGCTTTTCCACCACTCCACTCT	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXTCTACTTCAAAAAAAGTAAAGCATGGGTCTGTGATGATACAAC CTGTGTCTTTTATAAACTTGTATTACCAGTTTATTTCCTTGAACCATTTA CACTGCTAAAAACAAACAAACAACAACAACAAACCTGTATAATTCTACCA CCTACTAGTTAGGAGCAACGTAAACTTAAAACGTATCTAAAACATTATCT AAGCACAGATATTGACAACAATGTGAACATCGCCCTGCCCTTTTATAAAG ATGATTACTAGGGGTTTCAAAGCCAAGCTATGCAATCACTGAATTTTTAT ATCCACCCCTCCTCAGCCATATATCATCTTGGTTGCTTAAAAACCAACCC TGAATAAAACAAAATTAGAACAGCAGAAGGAAGGATCCCTTGTTAAAGAG CTTCAAAAAAAAAAAACAAAAAAGCAAAAATGGCGATTATCTGTTTTCAA AACGAGGCTGTAAACAAATGTATTGAAAATGTCATATTTTGGAGATGCCC TTCAAAGCTGCAGAATTTTAGTTCTTAATGCCTTGCCCTTGCACCCTGTA ATTCCCAAAAAAACAAACTTAATGTCTGCCCCTAACCCTACAATCCAACG GTTTAAAAAAACCAAAAAATGGTGGCCTTGTTTTTATGACCCCCACGCTT AAAGGGCATAACAAACAATTCCAATT
quality values	Open. Hide. 11 17 19 17 3 0 3 7 7 6 6 8 8 8 10 9 8 9 9 9 13 21 32 33 30 23 20 18 25 19 19 11 9 10 20 20 34 24 20 24 22 22 35 37 48 43 43 39 39 39 43 39 26 26 16 17 17 32 28 43 43 32 32 26 26 32 42 48 54 54 57 50 50 68 57 57 57 59 57 57 57 54 57 57 54 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 57 59 59 59 68 68 59 57 57 57 57 57 57 57 44 50 43 43 32 44 44 59 59 59 68 68 68 50 57 52 43 41 38 43 43 35 37 37 57 57 57 57 57 57 57 52 50 50 37 52 52 57 52 52 54 50 50 52 47 50 50 50 50 50 50 50 50 57 47 47 43 43 32 35 35 50 50 48 48 57 57 57 57 48 48 46 44 43 44 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 43 42 42 47 48 48 47 48 48 48 59 59 57 48 48 48 48 48 48 48 48 57 57 48 47 43 43 43 43 43 40 43 47 47 47 42 34 34 23 31 32 43 43 48 48 41 41 46 41 41 19 15 8 8 8 8 10 17 18 19 19 14 12 18 11 11 12 12 12 12 11 11 11 23 25 24 21 13 14 12 8 8 6 6 8 8 10 9 10 9 9 9 8 8 8 8 10 13 12 15 10 10 10 10 10 9 10 9 9 9 9 8 10 8 8 7 8 12 8 9 8 10 6 6 8 8 15 18 21 11 8 9 9 8 8 8 10 9 9 10 16 15 15 15 14 15 15 8 8 8 8 12 6 6 8 8 8 8 8 8 9 9 12 18 12 12 11 11 9 12 13 24 30 28 18 18 16 18 12 12 12 17 19 17 19 19 19 19 19 30 27 30 21 14 9 10 13 17 20 15 13 6 6 11 8 10 8 15 13 11 12 13 15 19 19 14 13 10 8 9 9 21 22 21 11 11 8 8 8 8 8 8 10 17 22 29 23 21 11 8 8 6 6 6 7 7 9 15 17 17 19 19 14 14 14 15 10 10 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 9 9 8 8 8 8 8 8 9 9 9 10 12 10 9 9 9 9 12 10 14 8 10 6 6 8 8 10 13 13 18 18 19 10 6 8 6 6 8 6 8 8 8 8 8 10 8 8 6 6 6 6 8 6 9 9 9 9 9 10 9 10 10 10 8 8 8 6 6 8 8 10 10 8 8 8 8 8 10 10 10 8 11 11 8 8 8 10 8 8 8 8 8 8 8 6 7 10 8 8 8 11 8 8 10 9 9 9 9 15 12 11 11 10 19 11 10 7 7 8 6 8 9 9 9 9 9 11 11 12 11 8 9 8 10 6 6 6 10 10 10 10 11 11 16 12 10 10 10 10 13 13 10 11 6 6 6 6 8 7 8 9 20 15 11 9 9 9 10 10 8 11 10 8 6 6 8 6 9 9 12 11 13 9 9 9 9 10 10 8 8 10 10 11 10 10 8 8 8 8 8 9 12 10 9 9 9 9 7 7 9 6 6 6 8 8 8 8 8 12 12 12 12 11 10 9 9 9 9 8 8 8 8 8 8 12 10 10 10 9 9 9 9 11 10 10 9 9 9 12 10 10 8 8 8 8 8 13 6 7 8 8 10 9 12 18 18 17 10 10 8 8 8 8 14 14 10 10 11 11 8 8 8 8 8 10 10 10 8 8 8 10 6 6 8 8 12 12 10 11 3 0 3 11 15 15 23 18 19 11 11 9 8 8 8 10 8 8 7 9 8 8 10 15 11 6 6 7 7 11 10 8 8 8 8 9 9 8 8 7 6 10 8 9 11 14 11 11 10 10 10 9 8 8 8 10 11 13 10 10 6 6 6 8 10 10 7 8 6 6 8 10 12 9 9 12 8 8 8 10 10 9 12 10 11 10 8 8 7	Open. Hide. 14 14 28 26 37 32 30 24 20 17 21 25 25 25 18 18 19 22 20 18 9 9 9 11 19 18 22 11 19 13 12 11 12 11 18 22 23 23 12 12 12 27 16 23 28 30 33 30 28 28 23 15 15 17 23 22 22 30 30 30 31 31 28 28 23 24 22 18 20 32 32 32 28 28 28 34 32 32 23 28 28 15 25 12 11 19 24 32 22 19 21 19 19 23 31 31 39 36 37 30 25 25 24 29 32 30 30 36 44 37 37 24 29 19 23 23 36 32 32 20 15 15 18 18 25 32 32 28 32 34 18 18 23 44 36 44 43 43 43 42 39 35 39 39 43 43 43 43 42 42 35 32 32 32 35 42 42 50 59 57 37 37 37 57 43 52 52 57 52 52 52 52 43 43 39 50 50 52 52 52 50 44 43 33 28 32 27 32 43 44 50 44 44 35 33 33 42 42 35 35 32 32 33 35 24 24 11 24 12 24 18 12 12 11 24 24 47 42 44 43 39 30 30 20 25 25 36 28 59 44 42 37 37 28 28 28 24 28 40 40 40 32 30 30 32 33 35 35 35 23 23 15 15 13 22 22 13 13 13 22 22 37 39 39 43 37 39 37 37 33 32 32 22 25 17 14 14 21 23 28 23 19 18 24 21 28 28 32 30 39 37 43 32 32 25 30 23 32 24 16 16 15 15 20 28 28 32 19 19 12 24 24 35 28 28 21 21 30 26 26 20 28 24 29 34 28 21 14 24 28 31 32 32 37 32 26 29 17 12 12 13 10 10 10 13 12 16 11 11 11 12 12 15 11 11 11 14 15 9 8 7 7 7 7 7 7 9 23 21 30 30 37 32 28 28 30 30 30 28 28 24 30 21 26 12 12 11 16 12 17 17 23 23 12 15 12 19 21 28 30 30 14 14 9 9 9 15 11 8 8 8 11 17 19 12 12 9 11 11 18 18 12 12 12 12 12 12 14 24 28 20 20 14 12 10 9 9 10 17 19 24 24 22 22 16 20 11 11 11 12 12 11 11 16 19 19 30 30 34 35 30 30 32 21 15 10 10 9 15 19 21 21 11 11 11 16 11 20 17 21 24 16 16 15 28 15 23 23 32 23 18 15 15 15 15 11 10 10 10 12 17 11 12 12 12 11 11 11 13 10 10 12 12 12 15 16 12 11 10 10 10 12 12 16 21 18 19 16 16 13 12 12 10 9 9 9 9 17 12 18 11 11 11 12 11 12 12 13 15 19 18 15 12 11 13 8 8 9 11 11 10 9 9 9 9 9 23 18 22 11 12 11 10 10 8 8 10 12 11 14 17 33 31 21 16 13 11 11 11 11 10 10 8 8 9 11 10 10 10 10 10 9 9 8 6 6 6 7 6 9 12 9 6 6 6 7 6 11 11 21 16 9 11 10 10 8 8 8 8 8 8 9 12 9 9 9 9 10 8 10 6 6 8 8 8 8 8 8 8 11 11 12 11 12 13 21 22 14 14 14 19 18 13 12 11 16 26 19 16 15 11 11 10 10 9 9 12 9 9 9 9 10 10 11 13 13 9 9 9 10 10 11 12 8 8 8 6 6 8 8 9 10 10 9 7 8 10 6 6 6 6 6 7 7 14 13 15 15 12 11 11 11 15 11 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no188_c01.b1 MSMg01no188_c01.b1 CHROMAT_FILE:
MSMg01no188_c01.b1 PHD_FILE: MSMg01no188_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:40 2005
         (207 letters)



>mm_chr17_30148441_30149047
          Length = 607

 Score =  389 bits (201), Expect = e-113
 Identities = 201/201 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttctgtcatatattgcatctccttttttattttatttagttgttcatgttctca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctgtcatatattgcatctccttttttattttatttagttgttcatgttctca 264

                                                                       
Query: 65  gtgtttattttcctggagcatatttacaatcattctttggaattctctgtctgagattca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgtttattttcctggagcatatttacaatcattctttggaattctctgtctgagattca 324

                                                                       
Query: 125 attccctccaactagatgccattacagtgaaattagttttaaggagttatgttgttttgg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attccctccaactagatgccattacagtgaaattagttttaaggagttatgttgttttgg 384

                                
Query: 185 atttttgtgattatgttcctg 205
           |||||||||||||||||||||
Sbjct: 385 atttttgtgattatgttcctg 405


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space:   118404
Effective search space used:   118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no188_c01.g1 MSMg01no188_c01.g1 CHROMAT_FILE:
MSMg01no188_c01.g1 PHD_FILE: MSMg01no188_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:40 2005
         (284 letters)



>mm_chr17_30255041_30255724
          Length = 684

 Score =  526 bits (272), Expect = e-154
 Identities = 281/284 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctacttcaaaaaaagtaaagcatgggtctgtgatgatacaacctgtgtcttttataaac 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 484 tctacttcaagaaaagtaaagcatgggtctgtgatgatacaacctgtgtcttttatagac 425

                                                                       
Query: 61  ttgtattaccagtttatttccttgaaccatttacactgctaaaaacaaacaaacaacaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttgtattaccagtttatttccttgaaccatttacactgctaaaaacaaacaaacaacaac 365

                                                                       
Query: 121 aacaaacctgtataattctaccacctactagttaggagcaacgtaaacttaaaacgtatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aacaaacctgtataattctaccacctactagttaggagcaacgtaaacttaaaacgtatc 305

                                                                       
Query: 181 taaaacattatctaagcacagatattgacaacaatgtgaacatcgccctgcccttttata 240
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 304 taaaacattatctaagcacagatattgacaacaatgtggacatcgccctgcccttttata 245

                                                       
Query: 241 aagatgattactaggggtttcaaagccaagctatgcaatcactg 284
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aagatgattactaggggtttcaaagccaagctatgcaatcactg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space:   185625
Effective search space used:   185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information