Query= MSMg01no191_d21.b1 MSMg01no191_d21.b1 CHROMAT_FILE:
MSMg01no191_d21.b1 PHD_FILE: MSMg01no191_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:46 2005
(313 letters)
>mm_chr17_77191934_77192646
Length = 713
Score = 466 bits (241), Expect = e-136
Identities = 289/309 (93%), Gaps = 8/309 (2%)
Strand = Plus / Plus
Query: 5 gaattcatacaatttgagatcctaatgtcagcatgtctgaatttttgacaagtaagcaaa 64
||||||||| |||| ||||||||||||||||||| || |||||||||||||| |
Sbjct: 213 gaattcatagaattggagatcctaatgtcagcat---tg-----ttgacaagtaagcaga 264
Query: 65 caaaacacattagccctgggatagtacatttgcatggcattttattattataccaatgag 124
|||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||
Sbjct: 265 caaaacacattagccctgggctagtacatttgcacggcattttattattacaccaatgag 324
Query: 125 gatttatattattttcattaaaaatttaaaagttaaaggatttatttaaaaccattggta 184
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 325 gatttatattatcttcattaaaaatctaaaagttaaaggatttatttaaaaccattggta 384
Query: 185 gtttagtttggaaacccaaattcccataatcacattgcaagtgaatcctccttaaaaacc 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 385 gtttagtttggaaacccaaattcccataattacattgcaagtgaatcctccttaaaaacc 444
Query: 245 ttgaatccaatatattgacaagagagagggttaggcagaaaatattgtccatgtagagct 304
||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 ttgaatccaatatattggcaagagagagacttaggcagaaaatattgtccatgtagagct 504
Query: 305 cagaggaaa 313
|||||||||
Sbjct: 505 cagaggaaa 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_d21.g1 MSMg01no191_d21.g1 CHROMAT_FILE:
MSMg01no191_d21.g1 PHD_FILE: MSMg01no191_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:46 2005
(285 letters)
>mm_chr17_77248256_77248940
Length = 685
Score = 460 bits (238), Expect = e-134
Identities = 274/286 (95%), Gaps = 2/286 (0%)
Strand = Plus / Minus
Query: 1 atagagagctgcctgcatcagcctcccaagtgctgtgattaaagaaggagtcatcaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atagagagctgcctgcatcagcctcccaagtgctgtgattaaagaaggagtcatcaccac 501
Query: 61 cacaacctggcaaagcactagtttttggctctgttagcacccattaactcattaaatatg 120
|||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 cacaacatggcaaaacactagtttttggctctgttagcacccgttaactcattaaatatg 441
Query: 121 tagcacgtagctgggtaaccatcaagtagatgcttatttacactaagttctatgttcctt 180
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 440 tagcacgtagctgggtaaccatcaagtagatgcttatttacagtgagttctatgttcctt 381
Query: 181 cttatatttgtcttgattgtgcatgtgttgctactt-gagaaatttttcatacacattac 239
||||||||||||||||||||||||||||||||| || | || ||||||||||| |||||
Sbjct: 380 cttatatttgtcttgattgtgcatgtgttgcta-ttggggatttttttcatacatattac 322
Query: 240 actgtgtattggtcaaaccaggataagtaaatatatccggagtttg 285
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 actgtgtattggtcaaaccaggataagtaaatatatcaggagtttg 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
