Query= MSMg01no191_o08.b1 MSMg01no191_o08.b1 CHROMAT_FILE:
MSMg01no191_o08.b1 PHD_FILE: MSMg01no191_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:40 2005
(329 letters)
>mm_chr17_14385821_14386549
Length = 729
Score = 574 bits (297), Expect = e-168
Identities = 318/325 (97%)
Strand = Plus / Plus
Query: 1 agcttttcacactgcacatgctacactcacataaccaacccctgaccgttagggcaggtt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcttttcacactgcacgtgctacactcacataaccaacccctgaccgttagggcaggtt 260
Query: 61 ttggatttttctgtggtatgagatgcttccaagagcatcctttacataggacattgtgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggatttttctgtggtatgagatgcttccaagagcatcctttacataggacattgtgca 320
Query: 121 gaacaccggcaatttctttaaatgaatggatggcttttcctgtctcctgggattgacttg 180
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 gaaccccggcaatttctttaaatgaatggatggctttccctgtctcctgggattgacttg 380
Query: 181 agttttatcttaaccttgcaggaaatggtaatttccagtatatcattcccttcatgggga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 agttttatcttaaccttgcaggaaatggtaatttccagtatatcattcccttcacgggga 440
Query: 241 cccacactagtctctccatttaatctttataacaggcatattagcttgttaaagctcatg 300
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 441 cccacactagtctctccatttaatctttataacaggcatattagcatgggaaagctcatg 500
Query: 301 tggacttagttaatagtgcctcttt 325
|||||||||||||||||||||||||
Sbjct: 501 tggacttagttaatagtgcctcttt 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_o08.g1 MSMg01no191_o08.g1 CHROMAT_FILE:
MSMg01no191_o08.g1 PHD_FILE: MSMg01no191_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:40 2005
(340 letters)
>mm_chr17_14479878_14480617
Length = 740
Score = 511 bits (264), Expect = e-149
Identities = 320/350 (91%), Gaps = 20/350 (5%)
Strand = Plus / Minus
Query: 1 gagactcctggacacagatggctgctctgcaagttacagctcttcctgcttctttgtagc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gagactcctgggcacagatggctgctctgcaagttacagctcttcctgcttctttgtagc 416
Query: 61 tgctgcctaacctataccttatgagagaccttagcccacaacccaggaggccggaatggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tgctgcctaacctataccttatgagagaccttagcccacaacccaggaggccggaatggc 356
Query: 121 aactggacttcctggaacatcagcatgcacccgtacaggtaccatctgaggcaggtacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aactggacttcctggaacatcagcatgcacccgtacaggtaccatctgaggcaggtacct 296
Query: 181 tcctattcccatctaaatttttctcctgcctgggaactctgtcacttctggggtctggtt 240
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 295 tcctattcccgtctaaatttttctcctgcctgggatttctgtcacttctggggtctgggt 236
Query: 241 ttaccttcgtaagaatcagaactggccgccctgtgtttttttttgcccccc---gccccc 297
||||||||||||||||||||||||||||| ||||| || ||| || ||
Sbjct: 235 ttaccttcgtaagaatcagaactggccgctctgtg----------cctcccactgcttcc 186
Query: 298 -------ccccatctttggaaaccagcccttgcacacctcccttgttaac 340
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 185 tggcaggccccatctttgggaaccagcccttgcacacctcccttgttaac 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
