Query= MSMg01no192_b24.b1 MSMg01no192_b24.b1 CHROMAT_FILE:
MSMg01no192_b24.b1 PHD_FILE: MSMg01no192_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:05 2005
(419 letters)
>mm_chr17_78268508_78269326
Length = 819
Score = 571 bits (295), Expect = e-167
Identities = 369/399 (92%), Gaps = 17/399 (4%)
Strand = Plus / Plus
Query: 16 gaattcttggtgcatgaatagaatttcaggatgggtgtttgggactgcacatatgtgtgt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattcttggtgcatgaatagaatttcaggatgggtgtttgggactgcacatatgtgtgt 275
Query: 76 aactggaacatgaggcctttttatgcatttggcagacagtgaaagaagcagtttacatga 135
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 276 aactggaacatgaggcctttttatgcaattggcagacagtgaaagaagcagtttacatga 335
Query: 136 agcacgggtttgtttaattgacaaataagaccttagggataatattggaataagcaaaga 195
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agcacgggtttgtttaattgacaaataagaccttagggataatattggaataagcaaagc 395
Query: 196 tagaggaagacctattctgaccacattcttcttcttcttcttcttcttcttcttcttctt 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tagaggaagacctattctgaccacattcttcttcttcttcttcttcttcttcttcttctt 455
Query: 256 cttcttcttcttcttcttcttcttcttcttcttcttcttctt--cttcttcttctcct-- 311
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 456 cttcttcttcttcttcttcttcttcttcttcttcttcttcttttcttctccttctcctcc 515
Query: 312 t--t--t--tctt--ttcttcttcttcttcttc--tttt--tcttt-tcttcttcttctt 358
| | | |||| | || |||| || || || | || ||||| ||||| |||||||
Sbjct: 516 tcctcctcctcttcctcctccttcctcctcctccctcttcctctttctcttcctcttctt 575
Query: 359 cttcttcttcttcttcttcttcttcttcttcttcttctt 397
||| |||||| ||||||||||| ||||||||||||||||
Sbjct: 576 ctttttcttcctcttcttcttcctcttcttcttcttctt 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 282
Number of extensions: 68
Number of successful extensions: 68
Number of sequences better than 10.0: 1
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_b24.g1 MSMg01no192_b24.g1 CHROMAT_FILE:
MSMg01no192_b24.g1 PHD_FILE: MSMg01no192_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:05 2005
(321 letters)
>mm_chr17_78420752_78421472
Length = 721
Score = 520 bits (269), Expect = e-152
Identities = 293/303 (96%), Gaps = 4/303 (1%)
Strand = Plus / Minus
Query: 5 ggtcagatatttttgtttcggggatgagagaagtaaccagcaccaggggggaagaagaca 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 468 ggtcagatatttttgtttcggggatgagagaagtaaccagcaccagaggggaagaagaca 409
Query: 65 atcacggctcccactcaagcactgggccatgaagatttcctcttagccttttggctctca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atcacggctcccactcaagcactgggccatgaagatttcctcttagccttttggctctca 349
Query: 125 tcaaagccactggagattgatggcctacctatcaaacatctactgctttcttcagagcat 184
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 348 tcaaagccactggagatttatggcctacctatcatacatctactgctttcttcagagcat 289
Query: 185 gaaattcaaatgagaatttcatccagaaacacatacatatacacacatacaagcatgctc 244
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 288 gaaattcaaatgagaatttcatccagaaacacatacatatacacacgtacaagcatgctc 229
Query: 245 acgtgtgtgagtgcacatgagtgtacacacacacacacacagacacacacacacacacac 304
||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 228 acgtgtgtgagtgcaaatgagtgtacacacacacaca----gacacacacagacacacac 173
Query: 305 aca 307
|||
Sbjct: 172 aca 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
