Query= MSMg01no194_e06.b1 MSMg01no194_e06.b1 CHROMAT_FILE:
MSMg01no194_e06.b1 PHD_FILE: MSMg01no194_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:05 2005
(471 letters)
>mm_chr17_64776663_64777533
Length = 871
Score = 717 bits (371), Expect = 0.0
Identities = 383/387 (98%)
Strand = Plus / Minus
Query: 84 accagtggacacctcttgcttggcaggttggtattgtatcttccagggttcagtaccaga 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 accagtggacacctcttgcttggcaggttggtattgtatcttccagggttcagtaccaga 812
Query: 144 taggaccattggtgtctttccttccccaaatagcctgcatagtactatcaaagatggctg 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 taggaccattggtgtctttccttccccaaatagcctgcatagtactatcaaagatggctg 752
Query: 204 actgggagggtgtcctggacagttcaagtttgaattctctgtgtcctgcaaccaaagggt 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 actgggagggtgtcctggacagttcaagtttgaattctctgtgtcctgcaaccaaagggt 692
Query: 264 gtgttgtcttcagctataagaaagatgtcatcttaaattttgttttgtggttttattact 323
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gtgttgtcttcagctataaggaagatgtcatcttaaattttgttttgtggttttattact 632
Query: 324 aacccttccctctagcacacatttcactttgcaaacacttaatttctaccacgacatgaa 383
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 631 aacccttccctctagcacacatttcactttgcaaacacttaatttctatgaggacatgaa 572
Query: 384 gtatatcatgtttatccatgtgctcctgacattttgagtgaatgactcatgcagagcagg 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gtatatcatgtttatccatgtgctcctgacattttgagtgaatgactcatgcagagcagg 512
Query: 444 ttcccaataaatgctgagatgtgtgtg 470
|||||||||||||||||||||||||||
Sbjct: 511 ttcccaataaatgctgagatgtgtgtg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_e06.g1 MSMg01no194_e06.g1 CHROMAT_FILE:
MSMg01no194_e06.g1 PHD_FILE: MSMg01no194_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:05 2005
(610 letters)
>mm_chr17_64638795_64639805
Length = 1011
Score = 1112 bits (575), Expect = 0.0
Identities = 604/617 (97%), Gaps = 8/617 (1%)
Strand = Plus / Plus
Query: 1 cagtgttgaggttcaacagtataatggggagacctaaatgaaaatatctgggtttttaat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 196 cagtgttgaggttcaacagtataa-ggggagacctaaatgaaaatatctgggtttttaat 254
Query: 61 tgtggataaatacatttcaaattaagtttgtatgttttagtttaagaaaataaaaagaag 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtggataaatacatttcaaaataagtttgtatgttttagtttaagaaaataaaaagaag 314
Query: 121 gtaagaagaggtaacaaatgtgtcccactgctgaaagtgtgcaatgtgtgaaaggaagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtaagaagaggtaacaaatgtgtcccactgctgaaagtgtgcaatgtgtgaaaggaagcc 374
Query: 181 aatctaactgcaaaagtctgtgctctgtggacaccagagcctctctgtgtctgtgtgcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aatctaactgcaaaagtctgtgctctgtggacaccagagcctctctgtgtctgtgtgcgt 434
Query: 241 tcatgcgtaaacaatcacagtgggagttatccgttagaaagatacctccatagcctgggc 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcatgtgtaaacaatcacagtgggagttatccgttagaaagatacctccatagcctgggc 494
Query: 301 taagcgctcttctagtgccatgtaggtaaggaactgaggatccacataagaaatagcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 taagcgctcttctagtgccatgtaggtaaggaactgaggatccacataagaaatagcttc 554
Query: 361 agcaactccaagtccgtctgcaaaaccatcaaacaggctgaaaaaaaaaaaaaaaac--- 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agcaactccaagtccgtctgcaaaaccatcaaacaggctgaaaaaaaaaaaaaaaaaaaa 614
Query: 418 ---ccaaaagacccataagtatcatttcggaaatcttacagtgaagataattttgtacta 474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aaaccaaaagacccataagtatcatttcggaaatcttacagtgaagataattttgtacta 674
Query: 475 ccatattggtaggctgtacaaattttgtaagcagaaaacttttgaaatatttgcatgtga 534
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 675 ccatattggtaggctgtacaaattttgcaagcagaaaacttttgaaatatttgcatgtga 734
Query: 535 attctatggaccaaagaacatgaagaacaacagaaaagttaa-tattaaatataaagagt 593
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 735 attctatggaccaaagaacatgaagaacaacagaaaagctaagtattaaatataaagagt 794
Query: 594 taatatagcctattggc 610
|||||||||||||||||
Sbjct: 795 taatatagcctattggc 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1011
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1001
Effective search space: 600600
Effective search space used: 600600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
