Query= MSMg01no201_b10.b1 MSMg01no201_b10.b1 CHROMAT_FILE:
MSMg01no201_b10.b1 PHD_FILE: MSMg01no201_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:58 2005
(200 letters)
>mm_chr17_32756307_32756906
Length = 600
Score = 313 bits (162), Expect = 4e-90
Identities = 186/194 (95%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttggtataccgaagtagagcctccccattggttccttttctccctgtgccact 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ggaattcttggtaga-ggaagtagagcctccccattggttccttttctccctgtgccact 338
Query: 64 ttccatttctgacctggtagtctgtgagtctgagtgtttgga-tttttttctgatttcaa 122
||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 337 ttctatttctgaggtggtagtctgtgagtctgagtgtttggattttttttctgatttcaa 278
Query: 123 cgacaacatgaatacttcatgcatgtttgtttatctgctgtgttccttgtggcatttggt 182
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 277 cgacaacatgaatacttcatgcatgtttgtttatctgctgtgttccttgtggtatttggt 218
Query: 183 ttctatatctatta 196
||||||||||||||
Sbjct: 217 ttctatatctatta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no201_b10.g1 MSMg01no201_b10.g1 CHROMAT_FILE:
MSMg01no201_b10.g1 PHD_FILE: MSMg01no201_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:58 2005
(287 letters)
>mm_chr17_32660173_32660859
Length = 687
Score = 553 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Plus
Query: 1 atgacccttctgcttccattgcccaagtgttaggaccacagtcacaagtcaccatgtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgacccttctgcttccattgcccaagtgttaggaccacagtcacaagtcaccatgtcca 260
Query: 61 gctagtggacagatcttaagactgttgtatacctagcaagaagggcccaaatggagattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctagtggacagatcttaagactgttgtatacctagcaagaagggcccaaatggagattc 320
Query: 121 tcagttttccaactgggagtcatagtcacagctgagattggacccagtagaggagtgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagttttccaactgggagtcatagtcacagctgagattggacccagtagaggagtgtca 380
Query: 181 tgcagtcacagaatgcaagggacctgaagaggaggacaggaacttgatacagaaaacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcagtcacagaatgcaagggacctgaagaggaggacaggaacttgatacagaaaacagg 440
Query: 241 acagagtcgtaagaaatcaggaaagaaaagatgggacagatgctga 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagagtcgtaagaaatcaggaaagaaaagatgggacagatgctga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
