CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAAGATCCGCGGA
ATTCCCAGGTTTTCCAAAAACTATTTATTTATTTATTTAATCATTTTATT
CATTTACATTTCAAATGGTAACCCTCTTCCCTCCATGTTACCCCTCCACA
ATGCCCCCATCTCATCCCCCTTCTTTCTCCTCCCCTTGTCTTAGTTTCTA
ATATGAGGAGAACAACCTAACTGCTTTAAGAATGTTTAATTGCAAGGAAG
TTCTAACCACAGGAAGACATGCCTACCAACTGGGTACCTACTTTGTATAC
TTTTCCCCAGTTACCTCTTGTTTTATTTAGCTTACAGTGTCAACTATATA
CAGTCTAGATTTACTTGACAGGACAGCCTCTAGATCAGATTGGCTTGAGG
CCATGGTTGACAGACAACATCTTGACAAATGATTGATGTAGGAGAGCCCA
CACCACTGTAGGTGGTATCCAAAGGAAGGTGGACATGGGCTGAGAATACT
TCTAACTAACCATGAGTCTACAAGTGATCCAGTCTAGTGACAGTCTTTCA
TGGTTTCTTCTTCAAGCTCCTACATGAGTTCCTGCACTGAATTCCATTAA
AGATAGGATTGTGACTTGAAATTGTAAGCCAAATCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTGTCTCTCTCTGC
CTCTCCCTGTCTCTCTCTGCCTGTC

NCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGGATTCACAAATGAAACAC
ACACTCACACACACACACACTCTCTCACCCTCTCTCTGGAAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT
CTGTTTTTTTTTGTCTTGCTTGTNTTTTCTTTCTNTTTGGTTTTTTCTTT
TCTTTTCTTTTTCTTCTTCTCTTCTTTTTTCTCCTCTCTTCTTTCTTTTC
CCTTCTTCTTCTTTCGTTTTCCCTTTTTTTTTCCGTCTTTTTTCCCTCTT
TCCTCTTACCCTTTTTTTTTTTTTTTCCCCTCTTCCTCTCTTTTTTTTTT
TCTTTTTTTTTCCTTTTTTTTTTTTTCCATCCCCCCAAAAAATACGATTT
TTCTTTTTTTTTCTCCTTTTTCTTTTTTTCCCCTTTTTTCTTTCTTCCTT
TTTTTTTTTTTTCCTTTTTTTTCTTTCCTTTTTCTTTCTTCTTTTTTTTT
TTTCCTCTCTTTTTTCCCCCTTTTTTTTTTTCTTTCCCTTTTTCTCTCCT
TTTTTTTCCCTATCCTTTCTCCTTTCTTTTTTCTTTCTTTTTTCTTTTTT
TTCCTCTTTNTCTTTTTTTTTTTTCTTCTTTTTTCTCTTTTTTTCCCCCT
TTTTTTTTCTTTTTTTTTTTTTCTTTTTTTTTTTTCCGCTTCCCTTCCCT
TCTTTTCTCTTTCCTTTTTACCTTTTTCTCTCTCCTTTTATTCCTTCCTT
TTCTTTCTTTTTCTTCTTTTTTTCTTTTG

Query= MSMg01no203_o10.b1 MSMg01no203_o10.b1 CHROMAT_FILE:
MSMg01no203_o10.b1 PHD_FILE: MSMg01no203_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:14 2005
         (654 letters)



>mm_chr17_17997427_17998480
          Length = 1054

 Score = 1160 bits (600), Expect = 0.0
 Identities = 642/658 (97%), Gaps = 4/658 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatttatttatttatttaatcattttattcatttacatttcaaatggtaaccctcttccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatttatttatttatttaatcattttattcatttacatttcaaatggtaaccctcttccc 260

                                                                       
Query: 61  tccatgttacccctccacaatgcccccatctcatcccccttctttctcctccccttgtct 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaggttacccctccacaatgcccccatctcatcccccttctttctcctccccttgtct 320

                                                                       
Query: 121 tagtttctaatatgaggagaacaacctaactgctttaagaatgtttaattgcaaggaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtttctaatatgaggagaacaacctaactgctttaagaatgtttaattgcaaggaagt 380

                                                                       
Query: 181 tctaaccacaggaagacatgcctaccaactgggtacctactttgtatacttttccccagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaaccacaggaagacatgcctaccaactgggtacctactttgtatacttttccccagt 440

                                                                       
Query: 241 tacctcttgttttatttagcttacagtgtcaactatatacagtctagatttacttgacag 300
           ||||||||||  || ||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 441 tacctcttgtcatagttagcttacagtgtcaactatatacagtctagagttacttgagag 500

                                                                       
Query: 301 gacagcctctagatcagattggcttgaggccatggttgacagacaacatcttgacaaatg 360
           || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 gagagcctctagatcagattggcttgaggccatggttgacagagaacatcttgacaaatg 560

                                                                       
Query: 361 attgatgtaggagagcccacaccactgtaggtggtatccaaaggaaggtggacatgggct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attgatgtaggagagcccacaccactgtaggtggtatccaaaggaaggtggacatgggct 620

                                                                       
Query: 421 gagaatacttctaactaaccatgagtctacaagtgatccagtctagtgacagtctttcat 480
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 gagaatacttctaactaaccatgagcctacaagtgatccagtctagtgacagtctttcat 680

                                                                       
Query: 481 ggtttcttcttcaagctcctacatgagttcctgcactgaattccattaaagataggattg 540
           ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 681 ggtttcttctttaagctcctacgtgagttcctgcactgaattccattaaaaataggattg 740

                                                                       
Query: 541 tgacttgaaattgtaagccaaatctctctctctctctctctctctctctctctctctctc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgacttgaaattgtaagccaaatctctctctctctctctctctctctctctctctctctc 800

                                                                     
Query: 601 tctctctctctctc----ggtgtctctctctgcctctccctgtctctctctgcctgtc 654
           ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctctctctctctctctcggtgtctctctctgcctctccctgtctctctctgcctgtc 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 86
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)