Query= MSMg01no204_d09.b1 MSMg01no204_d09.b1 CHROMAT_FILE:
MSMg01no204_d09.b1 PHD_FILE: MSMg01no204_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:40 2005
(646 letters)
>mm_chr17_67573128_67574173
Length = 1046
Score = 1067 bits (552), Expect = 0.0
Identities = 625/660 (94%), Gaps = 20/660 (3%)
Strand = Plus / Plus
Query: 4 ggaattcttctctgatac-caggacccaaagaaaggaaacatgtatccacccggaatgaa 62
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggaattcttctctgatacacaggacccaaagaaaggaaacatgtatccacccggaatgaa 249
Query: 63 acttttcatggcaccgttaacttactcgttattcaaagaggaaacactgaagaatactct 122
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 250 acttttcatggcagcgttaacttactcgtgattcaaagaggaaacactgaagaatactct 309
Query: 123 caaaccacaggataaacaaaatgtggcatggctgtacaattgagtattatggaaccaggg 182
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 310 caaaccacaggataaacaaaatgtggcatggctgtacaatcgagtattatggaaccaggg 369
Query: 183 tgagaaacgggacacctgaacactgcataataagacacgggaagctttcacaatgttgtg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgagaaacgggacacctgaacactgcataataagacacgggaagctttcacaatgttgtg 429
Query: 243 ctaaatgagagaagctgccacaaagggcacatgttaaaggagcccatcactgcacagcac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctaaatgagagaagctgccacaaagggcacatgttaaaggagcccatcactgcacagcac 489
Query: 303 accacatacgtagacgtgtaaaacctgccaaggaccacactaggggtgcaaatagccctg 362
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 accgcatacgtagacgtgtaaaacctgccaaggaccacactaggggtgcaaatagccctg 549
Query: 363 actgctaacgagtacagaatttctgaaatattgggggcctggagtagagacaggcaggac 422
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 550 actgctaatgagtacagaatttctgaaatattggggacctggagtagagacaggcagaac 609
Query: 423 ccggagtttactgtagttaaccagtcagtctcaggttccgtgagaaactgtctgaaaaac 482
|| ||||||| ||||||||||||||||| |||||||| |||||||||||| |||||||||
Sbjct: 610 ccagagtttattgtagttaaccagtcagcctcaggtttcgtgagaaactgcctgaaaaac 669
Query: 483 aggatggagagccaaggaagaaagacaataatcttcagctgctagactacacagatgtgt 542
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 670 aggatggagagccaaggaagaaagacaataatct-cagctgctagactacacagatgtgt 728
Query: 543 gtgtgtgtgcg----------------cgcacacacagagtgtacttaaatcttttaatt 586
||||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 729 gtgtgtgtgtgtgtgtgtgtgtgtgtgcgcacaca--gagtgtacttaaatcttttaatc 786
Query: 587 cttaactattagattgtccctttataatcttttctcactgtgttgtttgtttgtttgttt 646
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 787 cttaactattagattgtccctttataatcttgtctcactgtgttgtttgtttgtttgttt 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_d09.g1 MSMg01no204_d09.g1 CHROMAT_FILE:
MSMg01no204_d09.g1 PHD_FILE: MSMg01no204_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:40 2005
(104 letters)
>mm_chr17_67611888_67612391
Length = 504
Score = 199 bits (103), Expect = 3e-56
Identities = 103/103 (100%)
Strand = Plus / Minus
Query: 1 ccatgggcctgtactccaaagctctactctgtaaaatatataatcctccctgggtgcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccatgggcctgtactccaaagctctactctgtaaaatatataatcctccctgggtgcagg 244
Query: 61 acttggggatggaggacattggtggttagtgttgattgtgatg 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 acttggggatggaggacattggtggttagtgttgattgtgatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
