Query= MSMg01no207_i19.b1 MSMg01no207_i19.b1 CHROMAT_FILE:
MSMg01no207_i19.b1 PHD_FILE: MSMg01no207_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:38 2005
(249 letters)
>mm_chr17_86138827_86139475
Length = 649
Score = 443 bits (229), Expect = e-129
Identities = 244/249 (97%)
Strand = Plus / Plus
Query: 1 ggcaaggacttctcaccctagactttattcaagttttttggggggaggcatctgataacc 60
||||||||||| | | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcaaggacttttaagcatagactttattcaagttttttggggggaggcatctgataacc 260
Query: 61 aattgccaattcactttttggtatatcttttattaaactgcactgttttgctgagtcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattgccaattcactttttggtatatcttttattaaactgcactgttttgctgagtcaag 320
Query: 121 gcaaataagtacgtatttggataatttgatatacccaacgtgtggtggtttgaatgaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaaataagtacgtatttggataatttgatatacccaacgtgtggtggtttgaatgaaaa 380
Query: 181 tggcctccactggttcatagggagtagcactgtttgaatggattataaggttgtaattat 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcctccactggctcatagggagtagcactgtttgaatggattataaggttgtaattat 440
Query: 241 aaccttgtt 249
|||||||||
Sbjct: 441 aaccttgtt 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no207_i19.g1 MSMg01no207_i19.g1 CHROMAT_FILE:
MSMg01no207_i19.g1 PHD_FILE: MSMg01no207_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:38 2005
(337 letters)
>mm_chr17_86286844_86287580
Length = 737
Score = 553 bits (286), Expect = e-162
Identities = 324/340 (95%), Gaps = 9/340 (2%)
Strand = Plus / Minus
Query: 1 gttgtagccagcta---ccccgcctgaagtacccacataccagtgttctgttttcttaga 57
|||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 555 gttgtagccagctattt----ggctgaagtacccacataccagtgttctgttttcttaga 500
Query: 58 catatgatatccggatatttttaaaccccaagatgtgccactaaggccagggtcctttca 117
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 499 catatgatatagggatatttttaaaccccaagatgtgccactaaggccagggtcttttca 440
Query: 118 gtttgagactctggtttcagaaatttcagggtctactgggcaaactaagggtggaggaac 177
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 439 gtttgagactctggtttcagaaattttagggtctactgggcatactaagggtggaggaac 380
Query: 178 cccaagagcacctggacctgggggtaaaacagattcatagccaatggcccagcatgaggt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cccaagagcacctggacctgggggtaaaacagattcatagccaatggcccagcatgaggt 320
Query: 238 gagcctcagtacatgaatgtgtagctttgacagggatcaggagctcagatcttct-cgct 296
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 319 gagcctcagtacatgaatgtgtagctttgacagggatcaggagctcagatctt-tgcgct 261
Query: 297 ggttctgtctagtgttttgtttgtattgtctttagatagg 336
||| ||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggtcctgtctagtgttttgtttgtattgtctttagatagg 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
