Query= MSMg01no208_k22.b1 MSMg01no208_k22.b1 CHROMAT_FILE:
MSMg01no208_k22.b1 PHD_FILE: MSMg01no208_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:34 2005
(314 letters)
>mm_chr17_85614149_85614862
Length = 714
Score = 547 bits (283), Expect = e-160
Identities = 302/309 (97%), Gaps = 2/309 (0%)
Strand = Plus / Minus
Query: 6 aatttgaggtcaacctggactacataatgagaccctctctgacaacaaaca--aaaaaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 450 aatttgaggtcaacctggactacataatgagaccctctctgacaacaaacaagaaaaaaa 391
Query: 64 atgataagatactttaacaaatacccattgacatagtataaaatattctgtaccacagag 123
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 390 atgataagatactttaacaaatacccattgacgtagtataaaacattctgtaccacagag 331
Query: 124 cttagaaagtcaatgatccaactggcatagcaaaccaggaagggtaatggactatcaggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cttagaaagtcaatgatccaactggcatagcaaaccaggaagggtaatggactatcaggt 271
Query: 184 gaatgcaattatgtagaaaaattttaatccagcaacataatctgctctggcatgggatca 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaatgcaattatgtagaagaattttaatccagcaacataatctgctctggcatgggatca 211
Query: 244 catcctaggatctgatccagcagaatgcagacatgccctggatgacagcaggatctggct 303
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 210 catcctaggatctgatccagcagaatgcagacacaccctggatgacagcaggatctggct 151
Query: 304 ggagtataa 312
|||||||||
Sbjct: 150 ggagtataa 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no208_k22.g1 MSMg01no208_k22.g1 CHROMAT_FILE:
MSMg01no208_k22.g1 PHD_FILE: MSMg01no208_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:34 2005
(123 letters)
>mm_chr17_85578179_85578701
Length = 523
Score = 236 bits (122), Expect = 4e-67
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 1 atgtaagtgaatagcgtgtgacgcagagtaggtcctcaagaaactctggcttcgtcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtaagtgaatagcgtgtgacgcagagtaggtcctcaagaaactctggcttcgtcattg 260
Query: 61 acctgtcaagagtttaaaatttataatggaacagtctgttttcaggggttgtggtggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctgtcaagagtttaaaatttataatggaacagtctgttttcaggggttgtggtggttt 320
Query: 121 gg 122
||
Sbjct: 321 gg 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 123
Length of database: 523
Length adjustment: 8
Effective length of query: 115
Effective length of database: 515
Effective search space: 59225
Effective search space used: 59225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
