MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-211A09
Chromosome	17 (Build37)
Map Location	43,433,769 - 43,434,146
singlet/doublet	singlet
Overlap gene	Gpr110
Upstream gene	LOC627626, Opn5, Gpr115, Gpr111, EG546797, Cd2ap, Tnfrsf21, LOC100043770
Downstream gene	Gpr116, Mep1a, LOC100043332, Pla2g7, Tdrd6, Slc25a27, Cyp39a1, Dscr1l1, Enpp5, Enpp4, Clic5
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC627626 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 5 Proteins

name	Opn5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353344 MGI:2662912
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr115 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78249 MGI:1925499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 6 Proteins

name	Gpr111 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435529 MGI:2182728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG546797 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546797 MGI:3645904
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 7 Proteins

name	Cd2ap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12488 MGI:1330281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnfrsf21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94185 MGI:2151075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043770 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	Gpr110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77596 MGI:1924846
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr116 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224792 MGI:2182928
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mep1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17287 MGI:96963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Pla2g7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27226 MGI:1351327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tdrd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210510 MGI:2679727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74011 MGI:1921261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp39a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56050 MGI:1927096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dscr1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53901 MGI:1858219
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Enpp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83965 MGI:1933830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Enpp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224794 MGI:2682634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clic5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224796 MGI:1917912
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627626 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268851 GeneID:627626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 5 Proteins product : similar to CG11212-PA transcript_id : XM_001000454.2

name	Opn5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382780 GeneID:353344 MGI:2662912
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : opsin 5 transcript_id : NM_181753.3

name	Gpr115 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268852 GeneID:78249 MGI:1925499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 6 Proteins product : G protein-coupled receptor 115, transcript variant 2 transcript_id : XM_894986.3

name	Gpr111 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134949046 GeneID:435529 MGI:2182728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 111 transcript_id : NM_001033493.2

name	EG546797 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82993807 GeneID:546797 MGI:3645904
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 7 Proteins product : predicted gene, EG546797, transcript variant 1 transcript_id : XM_902301.1

name	Cd2ap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125987598 GeneID:12488 MGI:1330281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD2-associated protein transcript_id : NM_009847.3

name	Tnfrsf21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365760 GeneID:94185 MGI:2151075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor receptor superfamily, member 21 transcript_id : NM_178589.3

name	LOC100043770 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268853 GeneID:100043770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : hypothetical protein LOC100043770 transcript_id : XM_001481023.1

name	Gpr110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527001 GeneID:77596 MGI:1924846
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 110 transcript_id : NM_133776.1

name	Gpr116 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487170 GeneID:224792 MGI:2182928
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 116 transcript_id : NM_001081178.1

name	Mep1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982198 GeneID:17287 MGI:96963
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : meprin 1 alpha transcript_id : NM_008585.2

name	LOC100043332 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268715 GeneID:100043332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to hCG2042411 transcript_id : XM_001479985.1

name	Pla2g7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801997 GeneID:27226 MGI:1351327
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) transcript_id : NM_013737.3

name	Tdrd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38259207 GeneID:210510 MGI:2679727
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tudor domain containing 6 transcript_id : NM_198418.1

name	Slc25a27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357157 GeneID:74011 MGI:1921261
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25, member 27 transcript_id : NM_028711.2

name	Cyp39a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369036 GeneID:56050 MGI:1927096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 39, subfamily a, polypeptide 1 transcript_id : NM_018887.3

name	Dscr1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46560586 GeneID:53901 MGI:1858219
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region gene 1-like 1 transcript_id : NM_207649.1

name	Dscr1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46559378 GeneID:53901 MGI:1858219
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region gene 1-like 1 transcript_id : NM_030598.2

name	Enpp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14030778 GeneID:83965 MGI:1933830
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectonucleotide pyrophosphatase/phosphodiesterase 5 transcript_id : NM_032003.1

name	Enpp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872230 GeneID:224794 MGI:2682634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectonucleotide pyrophosphatase/phosphodiesterase 4 transcript_id : NM_199016.2

name	Clic5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85662398 GeneID:224796 MGI:1917912
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride intracellular channel 5 transcript_id : NM_172621.2

name	LOC627626 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94401988 GeneID:627626
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001000454.1

name	Opn5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38678530 GeneID:353344 MGI:2662912
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007602 - phototransduction [Evidence IEA]; GO:0018298 - protein-chromophore linkage [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : G protein-coupled receptor 136 product : opsin 5 protein_id : NP_861418.2

name	Gpr115 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82993803 GeneID:78249 MGI:1925499
definition	codon_start : 1 product : G protein-coupled receptor 115 isoform 2 protein_id : XP_900079.1

name	Gpr111 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134949047 CCDS:CCDS28792.1 GeneID:435529 MGI:2182728
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 note : G protein-coupled receptor PGR20 product : G protein-coupled receptor 111 protein_id : NP_001028665.2

name	EG546797 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82993808 GeneID:546797 MGI:3645904
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_907394.1

name	Cd2ap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125987599 GeneID:12488 MGI:1330281
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : SH3 domain-containing adaptor protein METS-1; mesenchyme-to-epithelium transition protein with SH3 domains 1; SH3 domain-containing adapter protein product : CD2-associated protein protein_id : NP_033977.3

name	Tnfrsf21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519885 CCDS:CCDS28794.1 GeneID:94185 MGI:2151075
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Death receptor 6; TNFR-related death receptor-6 product : tumor necrosis factor receptor superfamily, member 21 protein_id : NP_848704.1

name	LOC100043770 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268854 GeneID:100043770
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481073.1

name	Gpr110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527002 CCDS:CCDS28795.1 GeneID:77596 MGI:1924846
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G-protein coupled receptor; internal gene name of KIRIN laboratory:M5 product : G protein-coupled receptor 110 protein_id : NP_598537.1

name	Gpr116 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487171 GeneID:224792 MGI:2182928
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 116 protein_id : NP_001074647.1

name	Mep1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982199 GeneID:17287 MGI:96963
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008533 - astacin activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004238 - meprin A activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : meprin A alpha-subunit; meprin alpha product : meprin 1 alpha protein_id : NP_032611.2

name	LOC100043332 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268716 GeneID:100043332
definition	codon_start : 1 product : similar to hCG2042411 protein_id : XP_001480035.1

name	Pla2g7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980752 CCDS:CCDS28796.1 GeneID:27226 MGI:1351327
definition	GO_component : GO:0008247 - 2-acetyl-1-alkylglycerophosphocholine esterase complex [Evidence IEA] GO_function : GO:0003847 - 1-alkyl-2-acetylglycerophosphocholine esterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006954 - inflammatory response [Evidence TAS]; GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 note : phospholipase A2 group VII (platelet-activating factor acetylhydrolase, plasma); PAF acetylhydrolase product : phospholipase A2, group VII protein_id : NP_038765.2

name	Tdrd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38259208 CCDS:CCDS28797.1 GeneID:210510 MGI:2679727
definition	GO_component : GO:0018994 - polar granule [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : NY-CO-45-like; tudor repeat 2 protein product : tudor repeat 2 protein_id : NP_940810.1

name	Slc25a27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312006 CCDS:CCDS28798.1 GeneID:74011 MGI:1921261
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006839 - mitochondrial transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 25, member 27 protein_id : NP_082987.1

name	Cyp39a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256529 CCDS:CCDS28799.1 GeneID:56050 MGI:1927096
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence TAS] [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008396 - oxysterol 7-alpha-hydroxylase activity [Evidence IDA]; GO:0008387 - steroid 7-alpha-hydroxylase activity [Evidence IDA] GO_process : GO:0006699 - bile acid biosynthesis [Evidence IDA] [Evidence TAS]; GO:0030573 - bile acid catabolism [Evidence IEA]; GO:0006707 - cholesterol catabolism [Evidence IDA]; GO:0007586 - digestion [Evidence TAS]; GO:0006118 - electron transport [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 note : oxysterol 7alpha-hydroxylase; cytochrome P450, 39a1 (oxysterol 7alpha-hydroxylase); oxysterol 7-alpha-hydroxylase product : cytochrome P450, family 39, subfamily a, polypeptide 1 protein_id : NP_061375.1

name	Dscr1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560587 CCDS:CCDS28800.1 GeneID:53901 MGI:1858219
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; myocyte-enriched calcineurin interactin protein 2 product : Down syndrome critical region gene 1-like 1 isoform 1 protein_id : NP_997532.1

name	Dscr1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13447392 CCDS:CCDS28801.1 GeneID:53901 MGI:1858219
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; myocyte-enriched calcineurin interactin protein 2 product : Down syndrome critical region gene 1-like 1 isoform 2 protein_id : NP_085101.1

name	Enpp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14030779 CCDS:CCDS28802.1 GeneID:83965 MGI:1933830
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004551 - nucleotide diphosphatase activity [Evidence ISS] GO_process : GO:0009166 - nucleotide catabolism [Evidence ISS] codon_start : 1 product : ectonucleotide pyrophosphatase/phosphodiesterase 5 protein_id : NP_114392.1

name	Enpp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872231 CCDS:CCDS28803.1 GeneID:224794 MGI:2682634
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0009117 - nucleotide metabolism [Evidence IEA] codon_start : 1 product : ectonucleotide pyrophosphatase/phosphodiesterase 4 protein_id : NP_950181.2

name	Clic5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369886 CCDS:CCDS28804.1 GeneID:224796 MGI:1917912
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence ISS]; GO:0005626 - insoluble fraction [Evidence ISS]; GO:0005902 - microvillus [Evidence ISS] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : chloride intracellular channel 5 protein_id : NP_766209.1

clone name	MSMg01-072G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-292P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171D17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-211A09.T7 (MSMg01no211_a09.b1)	MSMg01-211A09.TJ (MSMg01no211_a09.g1)
ACC	AG392916	AG392917
length	1,594	1,303
length of high quality (start - end)	---	379 (70 - 448)
definition	CHROMAT_FILE: MSMg01no211_a09.b1 PHD_FILE: MSMg01no211_a09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:35:48 2005	CHROMAT_FILE: MSMg01no211_a09.g1 PHD_FILE: MSMg01no211_a09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:35:49 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NTTAACTATGCGTGCGCTATAGTANTCACTAATAGGGAGAGTGATCCCGC GATAATGTCGATACTAACCCATGTGAATGATATGTATGATGGAGCATATA TTACATAGATACTAGTAGAGTAAATTGTACTTAAAAGGTACAACATGAGA AGCGCCCGCGATTGTTGGAGATATATGGCAATATATCAATATGTGTTATT CTGATAGAAAAATTATTTGTTTCATGAATCATCATTTATCAAACATACAT GTATTAGCTAGACGAGAAGATAGTCAGTAAATGATGCCTTGATGTACTCG ACTAATTGTATATTGATTTATCTCGTATATATAATGCTTTGGTATCACGT AGGGCACGTATTTACAATACAGTAATAGTCTAGTTGTAGCCTGTGTGTAT ATAATATATTTCAACAACACTTTGAGATAGAGTATTTGTAATGGATGATA TTATTGTATATCACTGAATTTATCTTCGTTTGATGAGTATACATGTATTT TTTTTTTTTTATCTTGATACTTCTAATAGATAGTTTATTTTTATTACTGT ATAATAAAAACCATTTTTTTTTTTTTTTCCCCCCCCCCCCCCCTAAATTA TCTCCATCTCTCTACAAAAAAAAAAAAAGGGGGGGGGATTTTCTTTTTGT TATTTCTTTCAAATATATCAAATATATCTCCTACTAAGATGATTCGATAT TCTAGTATTTTATATTTTCACATACTCTAGATCTATCTTAGTTTTAAATA CATCTTCTTTTTTTATTTATATATAGATTAGTTAACATTCATATTTGTAA ATTGATTACTATAATTTTCTGTTATAATCCTATTTATGACTTTTATTCAG TTAATATACTATTTTATCTTTTTATAACTCATATTTTTATTATCTTTCAC TTTTTATCTTATTTTATCCTACATTTCTTTATTTTATTTTATTTATTTTT TTATTTATTTCACTTCTTTTAATACTTTAATTTTATACTGTTACGATTTT TTCTATGTCCCATATATTTTACTTTTTATTCTATTTTCTATTCCTTCATT ATTATTTTTCTAACAAATCATTAATTTAAATTTTCTAATATTTTTTTTAT TAATTTTTTATTATTTATATGTTTTTTATAACTAAAATTTTCATAAATCA TTCTTATCTTGTTTCTTTTTTATTTTATTCTATATATTTTTATTTGTATA TATCAATTTTATTTAACTATATATTTCAATATGNTTTCATTATACTTTCT CTCAAATTTTATATTGATTTATTAGTAAATATTTAATTTTATAATTTATT ATTTAATACTCTTATTTAATTATACTTTAAATTTTCTATTACTATCTATT ATAAATCTAATTGATCTAAATCTCTTCATTATATATCTTTTGTACATATA ATAGATTATATCTATTTAATTTATATTTCTTCTATCATCTTTTTATTCAT TGTATATTTTATATTATATTACTTATTGTATATAAATTATATATAATGTT CACTGATTATTTATAATTTTATCATATAAACATTNATTTTACTATATATA AATTTAAATTCAATATTTTTATCAGTATCATTTACTATCTTTTA	NNTTCAGAGGGGAGGCTGGGGCCGCXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXTTCCTGCGTTCACACATCTAGAATTGATTCT GGTAAACAAGAGAAATGGGGGTGGAGCCAAGGAAACTTTTTTGACTCAGA CAGCTAGCTGCCCACTTGGATTTTAGTGCATCTTTCTAAATCTCAGTAGA ATCCCACAGTCACAGAGCTGCACCAAGAAGTCCAAATGACATCCAAACCT CACCATGTGGTTTTGGATCTGCTGCGTGTAGGAGCTCTGACTGGATCCAG GCAAAGCTAACGGGACATCTCCACATCACCACTGCCCCTCAGCATCAGCT TCCCTAGCCAGGCAGAGTACAGTACAGTCCCTGTAGTACGCTGCGTTTTT TTTACCCCAGTCAACAAGCACTTACTTGCTCTCTCACAGAAATTATTTTT TTTTTTTTCCCCCCCCCCAGAGAGNAATTGCTCCTTGAAAAAAAAAAGGG TTGTGTGATGGCTGCTGTTCTGGGGGTCCAGGCTGGAGGGAGGAAACCAC GTATAGCTGTCTTCGCAGGCTCACTTCCAGGAACCCTTTTCGGCTTCTGC AGTCTGTGCATAGAACCCGAAATAGAACGGCGTTGCCTCAGTGTCCGCTT CCCAAACCAACATCTGCTCGGTCCTTGACTCCTGACTGCTTTCTGCAATC AATGATTCCTCATCAAAAACTGGGATGTTGTTGATGCTCTTTACTAGAAT AATTGGTCATTCTCTGTCCCCCTATCTCGTTTTTCTGAAACCCCTATCCC CTACTTCTCCCTCCTCGCACTGTCTTTTAACTTTCATTCTCACTGTTTAC TTTACCCTCTAGTTACTCATTGTTCCGCTCACAAATCTCATCTGTTTCTC ATCCTTTCTTTTTTTTCCCCCCTTTGTATTTTTCTATTTACCTTTTTTCA TCCCTCCATTCCTTTTTATCTCTTTCTCTCATCTCTTATTTTCTATACTT ATTTTCTCATCATATCTTCTCCTCTCAACTCTATTTCTCTTATCTCTATC TTTCTCTCCCTCTCTTTATCCTCTCTTTTTTGTCTTCTCTCTATCTCTCT CTCCGAACCTACTTTCCTTACTGCTTCTTTTCTCTTCCTTCTCCACTTCT TCCCTTTAACTTTCTCTTCTTCATTCCTCTTATAATCGCCGTCTTTCCTT TTCCCTCACCTTATTTCTTATCATCTCTCTCTCTTTTAACTTGTCGATCT TCTTTTTCACTTATGTCCTTTTAATTTTCTATCTTTCGCTTCTCATATTC CTG
quality values	Open. Hide. 0 3 6 6 6 7 7 7 8 6 6 6 6 6 6 8 10 8 8 8 6 8 6 3 0 3 11 8 8 8 8 8 9 13 17 24 22 15 17 10 7 7 9 14 15 15 6 6 6 8 6 9 9 7 8 10 11 8 13 15 13 12 8 8 8 10 9 12 13 10 13 10 10 10 8 6 6 6 8 8 7 7 10 8 6 6 6 8 11 6 6 6 6 9 8 8 10 10 9 8 8 8 8 6 6 8 8 11 7 7 8 8 8 10 8 8 8 8 7 8 8 8 8 8 8 8 10 10 8 8 8 8 8 10 10 6 6 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 9 9 10 6 6 6 6 6 8 8 10 8 6 6 7 7 6 8 8 6 9 7 7 8 8 11 9 9 15 11 11 9 11 10 9 9 9 9 13 8 8 8 8 10 10 9 6 10 6 9 10 12 8 6 6 10 8 10 11 10 10 10 12 13 21 15 16 11 8 8 6 6 8 8 9 10 10 9 10 10 12 9 9 9 9 13 12 10 8 8 8 8 8 12 21 24 12 12 12 12 11 10 7 6 8 8 6 6 8 8 8 8 10 10 10 13 10 10 8 8 7 6 8 8 6 6 8 8 8 10 7 7 8 8 8 8 10 10 10 10 10 10 13 8 8 8 8 8 8 8 10 10 13 11 8 8 7 7 11 10 8 8 9 9 11 8 19 17 8 8 8 10 10 8 8 6 8 8 8 8 8 8 8 9 8 10 8 8 8 8 9 9 12 8 8 6 6 6 10 8 10 10 7 7 8 6 10 10 10 10 11 10 10 8 8 8 12 10 8 8 8 8 6 6 8 8 6 7 8 8 9 9 10 8 6 6 6 8 8 10 8 8 6 6 8 8 8 8 8 6 8 8 10 10 16 10 11 10 9 6 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 9 9 9 9 9 9 9 8 8 8 8 8 8 10 8 8 8 6 6 8 8 8 9 8 8 8 6 6 8 8 8 10 6 6 8 8 11 11 11 11 11 11 11 11 10 10 8 8 7 7 8 8 9 10 8 10 10 8 8 13 13 14 19 18 19 17 11 11 13 12 11 11 11 8 10 8 8 8 8 8 8 8 8 8 9 9 10 9 8 8 9 10 9 9 11 10 6 6 6 10 8 12 12 11 15 11 11 10 11 10 11 11 11 11 10 8 8 8 8 10 8 9 9 9 12 16 21 18 20 18 22 27 12 12 12 12 11 9 14 14 14 18 21 14 15 16 14 16 14 29 25 27 23 25 22 22 22 28 22 19 16 11 11 11 10 9 8 8 6 6 8 8 9 9 10 10 10 13 16 20 29 32 28 30 27 24 11 10 8 8 8 8 10 12 12 10 14 15 12 17 13 15 14 9 7 13 6 10 10 8 10 7 7 8 8 8 8 6 8 6 6 6 6 8 8 8 8 12 8 8 6 6 6 6 8 8 8 8 8 10 10 9 8 8 8 8 8 8 8 9 11 10 10 10 8 8 8 8 8 7 8 8 6 9 8 8 8 8 8 8 8 8 8 6 6 8 8 10 11 12 8 8 7 6 8 8 8 8 8 9 9 10 10 6 6 6 6 8 8 8 8 7 7 8 8 8 8 12 10 8 8 8 6 6 8 8 8 6 6 8 6 9 11 10 13 9 9 10 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 10 8 9 9 8 8 8 8 8 8 11 12 12 12 11 11 11 12 16 10 10 9 9 9 10 8 8 8 7 8 8 8 8 8 8 10 10 9 8 8 6 6 6 6 8 8 9 8 8 8 8 8 6 6 8 8 9 9 9 9 13 11 8 7 7 8 8 6 6 8 8 8 8 8 8 8 9 10 10 10 10 13 8 10 8 8 8 8 8 8 8 8 10 9 10 10 11 11 11 12 11 11 11 9 9 10 10 10 10 10 8 6 6 8 8 8 8 8 8 11 8 8 6 6 8 8 8 7 7 11 10 10 6 6 6 6 10 8 10 8 8 8 9 13 13 13 13 10 10 8 8 8 8 8 8 9 10 8 7 6 8 8 8 8 8 18 13 12 11 11 11 8 8 6 7 8 8 13 12 12 12 13 12 13 13 9 8 8 10 8 8 9 11 10 10 10 10 10 10 9 12 8 8 10 11 10 8 8 8 8 8 8 8 8 8 8 8 6 10 6 6 8 8 8 6 6 6 8 8 8 8 10 10 15 12 12 10 11 11 10 10 10 12 12 12 10 10 8 8 8 8 8 8 8 6 6 8 8 10 6 6 8 8 8 6 6 12 6 9 10 10 8 8 8 8 9 8 8 8 8 8 8 9 8 8 6 6 8 10 10 8 8 15 12 12 8 8 8 8 8 10 8 6 6 8 7 7 10 8 10 9 9 9 9 9 11 11 12 8 8 6 6 8 8 9 9 9 10 11 11 12 18 15 12 10 10 10 9 9 9 9 9 8 8 7 6 8 6 10 10 11 18 12 11 11 11 8 8 12 8 8 8 8 8 9 10 10 9 9 9 9 9 9 8 8 6 6 8 8 9 8 8 8 8 10 12 12 11 10 10 10 10 8 8 8 10 8 8 9 9 9 9 15 15 12 13 15 12 10 10 10 10 8 8 8 6 6 8 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 9 9 14 12 8 8 8 8 6 6 3 0 3 10 7 8 8 8 9 11 9 9 9 8 8 8 10 9 9 9 10 8 8 10 10 8 8 10 10 10 8 10 8 8 8 8 10 8 13 10 9 8 8 8 8 9 10 11 8 8 8 8 8 8 15 13 10 10 10 8 10 8 8 8 8 8 8 8 8 8 8 9 9 8 8 10 8 8 8 10 10 10 10 12 8 8 6 6 8 8 8 8 8 10 8 9 9 10 11 11 11 10 10 9 8 8 8 6 6 8 8 12 12 12 12 8 8 8 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 6 6 8 8 8 6 6 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 10 8 8 8 8 8 10 9 10 8 10 8 7 7 9 9 10 15 13 8 8 8 8 8 8 8 8 6 8 6 6 8 8 8 6 6 8 6 7 6 8 8 6 6 6 6 12 12 6 6 8 8 10 8 8 8 8 8 8 8 6 6 6 6 6 6 6 8 8 10 7 9 12 12 12 10 13 10 8 8 6 6 6 6 8 8 13 8 6 6 6 6 13 8 8 8 8 13 8 8 10 8 8 8 6 6 6 6 6 8 8 8 8 8 8 8 6 7 7 9 12 12 6 6 8 8 6 7 8 8 11 8 8 6 6 8 10 8 8 8 6 8 8 9 3 0 3 15 12 10 10 8 8 8 8 6 6 8 7 8 10 8 8 8 8 8 8 8 8 8 9 10 11 10 12 7 6 8 8 8 6 6 8 10 8 6 6 8 8 8 8 8 9 8 7 6 8 8 8 6 6 8 8 8 6	Open. Hide. 0 0 3 6 6 6 9 9 9 11 8 8 8 8 8 8 6 6 6 6 11 9 8 10 8 8 3 0 3 21 21 22 10 10 10 19 21 33 30 32 30 33 34 42 47 47 47 47 47 50 47 48 43 48 43 48 57 57 57 57 57 43 34 20 11 12 12 21 24 28 36 36 46 46 43 48 46 50 50 50 50 47 47 48 47 47 50 50 42 42 32 35 35 43 43 54 54 54 48 42 43 42 27 21 18 11 11 11 16 21 32 39 43 43 43 43 43 41 43 41 40 30 25 18 13 9 9 9 9 10 18 29 34 37 37 37 37 47 48 57 48 48 48 47 43 43 37 30 30 40 43 57 48 50 43 43 39 40 43 43 48 59 68 68 68 48 50 47 47 47 48 47 47 42 39 46 42 32 32 24 30 39 44 44 57 57 57 57 57 41 43 46 44 27 32 24 32 24 29 24 42 42 59 59 57 57 57 57 57 57 50 43 43 43 43 47 57 57 57 57 48 57 59 59 59 57 57 57 52 52 52 59 59 59 59 59 59 57 52 43 43 43 57 52 52 52 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 57 57 52 57 52 52 52 52 52 52 52 57 59 52 52 57 52 52 52 50 50 52 52 52 57 57 54 54 52 46 43 43 43 44 50 50 54 57 57 57 59 50 50 48 57 57 54 57 57 57 31 31 20 27 27 32 32 43 44 57 57 57 57 57 48 41 41 26 32 30 47 44 44 46 47 48 48 48 48 59 48 54 48 48 48 48 48 57 42 39 35 39 35 36 36 42 42 43 32 32 32 32 35 39 39 39 39 39 59 43 57 48 43 43 36 36 36 39 39 34 34 15 10 10 8 8 8 9 8 8 8 8 10 13 26 34 37 35 30 30 32 39 59 59 48 48 48 48 48 48 59 59 48 48 43 47 43 43 59 59 59 59 32 32 20 20 23 32 37 42 34 27 17 13 10 10 11 12 11 13 13 19 19 17 21 15 16 15 21 24 28 32 32 19 19 10 9 9 9 13 23 18 3 0 3 16 12 17 15 11 10 10 10 15 13 12 12 9 11 9 10 12 10 9 9 9 6 8 6 9 9 9 12 16 16 14 9 9 9 13 9 9 9 11 10 10 13 15 25 30 28 23 23 23 12 9 9 9 9 11 16 9 9 9 16 22 25 19 12 12 19 21 28 30 24 30 24 14 12 10 10 10 14 14 23 28 23 28 28 39 32 34 32 28 28 25 23 18 10 10 10 13 13 16 20 28 22 23 23 20 20 20 22 29 33 32 32 23 18 15 24 24 35 39 40 43 39 34 25 21 15 19 10 10 8 12 8 12 10 15 12 19 16 12 12 11 12 12 17 14 13 13 11 10 9 14 12 9 9 12 12 10 10 12 13 13 17 11 11 15 13 21 13 12 14 14 21 22 24 24 15 15 14 22 23 28 28 28 28 30 30 37 37 33 31 31 18 18 13 13 13 15 15 24 31 24 19 19 12 12 9 20 16 14 14 21 10 8 8 8 8 8 8 8 8 10 8 8 8 8 6 6 8 8 8 8 12 11 10 8 8 9 11 10 8 8 8 8 8 8 11 9 9 9 9 9 8 8 6 6 8 8 9 10 10 11 11 11 10 12 8 8 8 8 8 8 8 8 8 10 8 10 10 15 11 10 9 8 8 10 10 10 9 15 12 12 11 11 8 8 6 6 8 8 8 8 8 8 8 8 10 10 8 9 10 10 11 12 11 11 9 12 11 12 12 8 8 8 8 8 10 10 11 9 8 8 8 8 8 7 7 10 7 6 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 6 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 6 7 8 10 11 7 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 6 7 8 6 6 8 8 10 10 13 11 11 11 9 9 9 9 8 10 10 10 9 9 12 12 15 12 11 14 8 8 8 8 8 8 8 8 8 8 8 8 8 12 10 10 17 8 8 6 6 8 8 8 8 8 8 8 11 10 8 8 11 8 8 8 8 10 13 10 10 10 10 15 15 15 21 19 18 10 8 8 8 10 10 8 6 6 8 8 8 10 8 8 8 6 6 8 8 11 8 8 8 11 13 11 10 8 8 6 6 6 6 8 8 7 9 11 12 15 12 9 8 8 6 6 8 8 6 6 8 8 8 10 6 8 8 8 8 8 8 8 8 8 6 6 6 6 8 10 7 9 7 6 8 8 10 10 8 8 6 6 8 8 11 9 9 12 13 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 7 8 8 8 8 8 8 10 13 13 11 9 9 9 11 10 10 10 8 8 8 8 10 9 9 10 8 6 6 8 8 9 12 11 9 9 11 9 9 8 8 6 6 6 8 8 8 8 10 15 10 10 7 6 8 8 8 8 8 8 10 8 8 10 10 10 10 10 9 7 6 6 8 8 9 10 10 10 10 10 9 9 9 11 11 10 10 11 9 8 8 8 8 8 8 10 10 10 8 6 6 6 6 8 8 10 8 8 8 8 8 8 8 10 8 8 8 6 8 8 9 9 9 10 7 9 6 6 8 8 8 10 8 8 8 7 6 6 6 10 9 8 8 6 6 6 8 10 9 7 8 8 8 8 8 8 6 6 8 8 8 7 7 8 8 8 8 8 8 8 6 11 9 9 10 8 8 6 6 7 10 13 10 10 8 11 11 8 8 8 8 8 8 8 6 8 8 8 8 10 8 8 8 8 8 6 6 7 7 7 6 6 6 8 9 10 13 9 8 8 8 8 8 8 10 8 8 6 6 8 8 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no211_a09.g1 MSMg01no211_a09.g1 CHROMAT_FILE:
MSMg01no211_a09.g1 PHD_FILE: MSMg01no211_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:49 2005
         (379 letters)



>mm_chr17_43433569_43434349
          Length = 781

 Score =  598 bits (309), Expect = e-175
 Identities = 360/387 (93%), Gaps = 20/387 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcctgcgttcacacatctagaattgattctggtaaacaagagaaatgggggt----gga 56
           |||||||||||||||||||||||||||||||| |||| |||||||||||||||    |||
Sbjct: 578 ttcctgcgttcacacatctagaattgattctgataaagaagagaaatgggggttggggga 519

                                                                       
Query: 57  gccaagg-aaacttttttgactcagacagctagctgcccacttggattttagtgcatctt 115
              |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ---aaggaaaatttttttgactcagacagctagctgcccacttggattttagtgcatctt 462

                                                                       
Query: 116 tctaaatctcagtagaatcccacagtcacagagctgcaccaagaagtccaaatgacatcc 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tctaaatctcagtagaatcccacagtcacagagctgcaccaagaagtccaaatgacatcc 402

                                                                       
Query: 176 aaacctcaccatgtggttttggatctgctgcgtgtaggagctctgactggatccaggcaa 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aaacctcaccatgtggttttggatctgctgcgtgtaggagctctgactggatccaggcaa 342

                                                                       
Query: 236 agctaacgggacatctccacatcaccactgcccctcagcatcagcttccctagccaggca 295
           ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 341 agctaacaggacatctccacatcaccactgcccctcagcatcagctgccctagccaggca 282

                                                                       
Query: 296 gagtacagtacagtccctgtagtacgctgcgtttttttta------ccccagtcaacaag 349
           |||||||||||||||||||||||| |||||| |      |      ||||||||||||||
Sbjct: 281 gagtacagtacagtccctgtagtatgctgcggt------aagagcaccccagtcaacaag 228

                                      
Query: 350 cacttacttgctctctcacagaaatta 376
           |||||||||||||||||||||||||||
Sbjct: 227 cacttacttgctctctcacagaaatta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 781
Length adjustment: 9
Effective length of query: 370
Effective length of database: 772
Effective search space:   285640
Effective search space used:   285640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information