Query= MSMg01no214_g15.b1 MSMg01no214_g15.b1 CHROMAT_FILE:
MSMg01no214_g15.b1 PHD_FILE: MSMg01no214_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:43 2005
(656 letters)
>mm_chr17_24037152_24038210
Length = 1059
Score = 1098 bits (568), Expect = 0.0
Identities = 633/656 (96%), Gaps = 5/656 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttcaactacgatgacaa---ggacggtcaagtgtatggctcaactgccggga 61
|||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattcagctcaactataatgacaacgaggacggtcaagtgtatggctctactgccggga 264
Query: 62 aggaaatggtagccagactgtctaaggaagagcacatcactggggtcgaaggctcatact 121
||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
Sbjct: 265 aggtgatggtagccagactgtctaaggaagagcacatcattggggtcgaaggcacata-t 323
Query: 122 c-tccttctgctttaactcagatagtctttacaaccacccagccgcgccagctaatggtg 180
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 324 aatccttctgctttaactcagatagtctttacaaccactcagccgcgcctgctaatggtg 383
Query: 181 gggtatcacgtgggtatttatcagtactctagctaccctgatgatcccagctttgtgctc 240
||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 384 gggtatctcgtgggtaattatcagtactctagctaccctgatgatcccagccttgtgctc 443
Query: 241 aagggagcttgtgtctcttggagggcaggtggcataaagagtatcttgtttttgtgggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagggagcttgtgtctcttggagggcaggtggcataaagagtatcttgtttttgtgggga 503
Query: 301 agtgaaaacagttcatgtgtgaaatatggccactcaggctgaagtggtctgtgtcaggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtgaaaacagttcatgtgtgaaatatggccactcaggctgaagtggtctgtgtcaggta 563
Query: 361 cttccaaactgaacccatgaataaatacaacatctgcatgagctgtgtgtccaagtgcaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 564 cttccaaactgaacccatgaataaatacaacatctgcatgagctgtgtgtccaactgcaa 623
Query: 421 tccttgagtctgagaggcttctgtgatctgaaatgaagggtgggtagaaatggatccggc 480
|||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 624 tccttgggtctgagaggcttctgtgatctgaaatgaacgttgggtagaaatggatccggc 683
Query: 481 aagggtttggggcctgcctacaaagaccctaagctacaatctctgaggtgttagctcaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagggtttggggcctgcctacaaagaccctaagctacaatctctgaggtgttagctcaga 743
Query: 541 gaccaccactgtgcactgtgccctgcaccagggccaaacccggcacctctgctggccctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaccaccactgtgcactgtgccctgcaccagggccaaacccggcacctctgctggccctg 803
Query: 601 caatgctccagacttctctggtgatacaagggaggccattagtcatctgccaatag 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 caatgctccagacttctctggtgatacaagggaggccattagtcatctgccaatag 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1059
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1049
Effective search space: 677654
Effective search space used: 677654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_g15.g1 MSMg01no214_g15.g1 CHROMAT_FILE:
MSMg01no214_g15.g1 PHD_FILE: MSMg01no214_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:44 2005
(620 letters)
>mm_chr17_24103897_24104916
Length = 1020
Score = 899 bits (465), Expect = 0.0
Identities = 465/465 (100%)
Strand = Plus / Minus
Query: 156 aggacagcggagtggaacaaacgaaaaagccccagttctgccctccaattttgtttcaca 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 aggacagcggagtggaacaaacgaaaaagccccagttctgccctccaattttgtttcaca 961
Query: 216 atttattttcctaagcaggatctcatgttgcccagcctggacctggcttactatgtagct 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 atttattttcctaagcaggatctcatgttgcccagcctggacctggcttactatgtagct 901
Query: 276 tccagtgactttgactccagagcacccaacttttacctctggagtgctggcattagacgg 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 tccagtgactttgactccagagcacccaacttttacctctggagtgctggcattagacgg 841
Query: 336 acgagccactaagcccggtttcaccctgcatccctgcttaacccatgacaatcggcaaac 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 acgagccactaagcccggtttcaccctgcatccctgcttaacccatgacaatcggcaaac 781
Query: 396 ctaccctgcaggagtgaagccctaggaggtgtccaaacaagagccctctttagacagcag 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ctaccctgcaggagtgaagccctaggaggtgtccaaacaagagccctctttagacagcag 721
Query: 456 cccttatcccttcatcaggtgacctcacagcccagttctgagagccccttcttttcccag 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cccttatcccttcatcaggtgacctcacagcccagttctgagagccccttcttttcccag 661
Query: 516 gacgatagtgccaagatggacatttctacttatagcgccctctcacctggcttccagctt 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gacgatagtgccaagatggacatttctacttatagcgccctctcacctggcttccagctt 601
Query: 576 aggtagcaggcaaggaggtgctggggttgggttgggggtagctgg 620
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aggtagcaggcaaggaggtgctggggttgggttgggggtagctgg 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
