Query= MSMg01no216_b14.b1 MSMg01no216_b14.b1 CHROMAT_FILE:
MSMg01no216_b14.b1 PHD_FILE: MSMg01no216_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:57 2005
(173 letters)
>mm_chr17_25879278_25879850
Length = 573
Score = 335 bits (173), Expect = 1e-96
Identities = 173/173 (100%)
Strand = Plus / Minus
Query: 1 agtcatcctggagacccagctgtgcagcgaggttggccaagcagctgagctgagcagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agtcatcctggagacccagctgtgcagcgaggttggccaagcagctgagctgagcagggg 314
Query: 61 gtagagggcaagcagcaggttactgtctgtccagtgtggaccggccctggtgggacactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtagagggcaagcagcaggttactgtctgtccagtgtggaccggccctggtgggacactg 254
Query: 121 ctccgcccctacccccctcagcagaaggcatgctttaaggaggaactggagac 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctccgcccctacccccctcagcagaaggcatgctttaaggaggaactggagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 573
Length adjustment: 8
Effective length of query: 165
Effective length of database: 565
Effective search space: 93225
Effective search space used: 93225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no216_b14.g1 MSMg01no216_b14.g1 CHROMAT_FILE:
MSMg01no216_b14.g1 PHD_FILE: MSMg01no216_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:57 2005
(377 letters)
>mm_chr17_25721049_25721825
Length = 777
Score = 584 bits (302), Expect = e-171
Identities = 351/376 (93%), Gaps = 14/376 (3%)
Strand = Plus / Plus
Query: 2 tcactctgtagaccaggctggccacgaactcagagatctgcccgcttctgcctccccaac 61
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 216 tcactctgtagaccaggctggccacgaactcagagatctgcccacttctgcctccccagt 275
Query: 62 gcaggctttaaaggtgtgcaccaccattgtctggctctttttttttcttttcccccttag 121
|||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 276 gcaggctttaaaggtgtgcaccaccatt--------------ttttcttttcaaacttag 321
Query: 122 atgatgctgttcattgcttgtgtataagagcacagtcggctcttctgttctgaccttgtg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgatgctgttcattgcttgtgtataagagcacagtcggctcttctgttctgaccttgtg 381
Query: 182 acccatcccatgatcttgattaatttaccattagtgctaacggttgccatttttgtcttg 241
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 382 acccatcccatgatcttgattaatttaccattagtgctaacggttgtcatttttgtcttg 441
Query: 242 tttttgtaagttctttgggatcatccacatagaccatcttttgctaatgaagacacttct 301
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 442 tttttgtaagttctttgggatcatccacatagaccatcttttgctaatgaagacactttt 501
Query: 302 gcatcccccgtctgtgtgtgtgcctcttttttctctcctctctcataccttttcctttgc 361
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 502 gcatcccccgtctgtgtgtgtgcctcttaactctctcctctctcataccttttcctttgc 561
Query: 362 tttattctactcctcc 377
||||||||||||||||
Sbjct: 562 tttattctactcctcc 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
