Query= MSMg01no216_e11.b1 MSMg01no216_e11.b1 CHROMAT_FILE:
MSMg01no216_e11.b1 PHD_FILE: MSMg01no216_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:12 2005
(296 letters)
>mm_chr17_75958773_75959468
Length = 696
Score = 559 bits (289), Expect = e-164
Identities = 295/297 (99%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 1 acaccatatcaggtgctgaaacgtcatgctgcgggttataaaagcagcgccattttccca 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acaccatatcaggtgttgaaacgtcatgctgcgggttataaaagcagcgccattttccca 592
Query: 61 gttc-gggatcttcctgagaagcaagcaataaagctcttgccgcggaagattctggtttg 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gttcggggatcttcctgagaagcaagcaataaagctcttgccgcggaagattctggtttg 532
Query: 120 ttgcgtctttcttgccggtcgagcgggacgcaataagttacttctctctggatgattttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttgcgtctttcttgccggtcgagcgggacgcaataagttacttctctctggatgattttc 472
Query: 180 ttacagcacagaaaaaaataacaaacataagtggttaactaaggacaagccattagcaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttacagcacagaaaaaaataacaaacataagtggttaactaaggacaagccattagcaat 412
Query: 240 gtgaacatatcaagctgttaataatgtgtatacacagattcctgtttataatactga 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtgaacatatcaagctgttaataatgtgtatacacagattcctgtttataatactga 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no216_e11.g1 MSMg01no216_e11.g1 CHROMAT_FILE:
MSMg01no216_e11.g1 PHD_FILE: MSMg01no216_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:13 2005
(642 letters)
>mm_chr17_75777293_75778334
Length = 1042
Score = 1210 bits (626), Expect = 0.0
Identities = 638/642 (99%)
Strand = Plus / Plus
Query: 1 atgttacagtcactattctcaggcttcctccctgtatggctgaacttaccgctattacaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 atgttacagtcactattctcaggcttcctccctgtatggctgaacttagtgctattacaa 260
Query: 61 gaatataaatgtttgggtccagcttttagaacacaaagaggacacccattttttaaatta 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gaatataaatgtttgggtccagcttttagaacacaaagaggacgcccattttttaaatta 320
Query: 121 tttatttagctgtgctatattgcatttgtagccaaccttctctgctgtcagctagttggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttatttagctgtgctatattgcatttgtagccaaccttctctgctgtcagctagttggc 380
Query: 181 tagctatcagtcatctgatgggaaacactggcagtgactacatgggaaggttgaccttcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagctatcagtcatctgatgggaaacactggcagtgactacatgggaaggttgaccttcg 440
Query: 241 gaaaaggccgggggtgggcaggcttgattggtttatggctgcaagtttcctcagtgctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaaggccgggggtgggcaggcttgattggtttatggctgcaagtttcctcagtgctat 500
Query: 301 ggtttacaggagtcccacgaagtataaaccctgccaagactttagatttcattacttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtttacaggagtcccacgaagtataaaccctgccaagactttagatttcattacttccc 560
Query: 361 tgtcctcgacaagtacaatttaattgaacattaagcaatttgatctctttcacctaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtcctcgacaagtacaatttaattgaacattaagcaatttgatctctttcacctaataa 620
Query: 421 atcgagcaaattcaataaacataaatcctgctaatgatggagctgaccctgacggaggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcgagcaaattcaataaacataaatcctgctaatgatggagctgaccctgacggaggct 680
Query: 481 gagctcatcgacgttcatggttatgactctccctggaatttgaaccacagatgcttatga 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 gagctcatcgacgttcatggttatgactctccgtggaatttgaaccacagatgcttatga 740
Query: 541 ctgatgagcaaagtacttacctgatgctcagggtctggggactgcattgaacaatttgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgatgagcaaagtacttacctgatgctcagggtctggggactgcattgaacaatttgcc 800
Query: 601 tagggtgtcataagagcagctgcaaaaagaccaggtttggca 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tagggtgtcataagagcagctgcaaaaagaccaggtttggca 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
