CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTT
CTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTCT
TTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATT
AGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCT
GTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTT
TCTCCTCTATAAGTTTCAGCGTCTCTGGTTTTATGTGAAGTTCTTTGATC
CATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCAT
TCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGC
TGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGA
CCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTC
TACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTACCACAATTGCTC
TGTAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTA
TCCTTGAGAAGAGTTTTTTGCTATCCG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTGCTGGCGAGATACTAGCTCAGG
ATAGTTTTGTGGTTATAGCCATTAAAGTGCTATTTAGCTTTTACTGTGTA
GTTATCTTTGAAGATTGCATTGCATATTGTATTATATTATATTTTAGGTA
ACCTGAATTATAATTTCCATCCTGTGTCTAATCATATGTTTTCTGTAGAC
TAACTCAGTATCTCTTTTCATTAAGCATCTCTTATTAGCCACAGTTCTAA
AGCTCACAATTTCTTTCTATATACTTATGTAATGTTTTCTTTCAGTATTC
TTGTAACACCCTGAATTTCCTTTCCTTCTTGTTTTGTTTTTTTTGTTTTT
TTTTTTTTAATCTTTTGAGACAAGTATTTGTAGCCTAGGCTGGTCCGAAA
CTCCCTATGTAGCTAAGGATGATCTTGACCTGATCCTCCTTCCAAATGCC
GAGGTTACAGGCATGTGCCACCATGCCAGCAATACTCTTTTCATCCTCTC
ACATCCTCTTCTACATTCACTAGTTACTTACTTTTTTCTCCTTTACCAAG
TTATTGAATGAGTTCAAATCCAGCCAAAGCAACTTATAAAGACCTTTATT
TAAAAGAAAAGGTAAAAACAGGAATGGAATTAAGTTGGTGGTAAAACACA
TGCCTAACATGTTTGAGATCTTTAGCCTTC

Query= MSMg01no216_j11.g1 MSMg01no216_j11.g1 CHROMAT_FILE:
MSMg01no216_j11.g1 PHD_FILE: MSMg01no216_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:39 2005
         (654 letters)



>mm_chr17_71914654_71915707
          Length = 1054

 Score =  731 bits (378), Expect = 0.0
 Identities = 553/632 (87%), Gaps = 44/632 (6%)
 Strand = Plus / Plus

                                                                       
Query: 28  gttttgtggttatagccattaaagtgctatttagcttttactgtgtagttatctttgaag 87
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 228 gttttgtggttatagccattaatgtgctatttagcttttactgtgtagttatctttgaag 287

                                                                       
Query: 88  attgcattgcatattgtattatattatattttaggtaacctgaattataatttccatcct 147
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 actgcattgcatattgtattatattatattttaggtaacctgaattataatttccatcct 347

                                                                       
Query: 148 gtgtctaatcatatgttttctgtagactaactcagtatctcttttcattaagcatctctt 207
           ||||||||||||||||       |||||    ||||||||||||||||||||| ||||||
Sbjct: 348 gtgtctaatcatatgt-------agact----cagtatctcttttcattaagcctctctt 396

                                                                       
Query: 208 attagccacagttctaaagctcacaatttctttctatatacttatgtaatgttttctttc 267
           |   |||||||||||||||||||||||||||||||||||| | ||||||| |||||||||
Sbjct: 397 a---gccacagttctaaagctcacaatttctttctatatagtcatgtaattttttctttc 453

                                                                       
Query: 268 agtattcttgtaacaccctgaatttcctttccttcttgttttgttttttttgtttttttt 327
           ||||||||||||||||| ||||||||  ||| ||||||||  |||||||           
Sbjct: 454 agtattcttgtaacacc-tgaatttc--ttc-ttcttgtt--gtttttt----------- 496

                                                                       
Query: 328 tttttaa--tcttttgagacaagtatttgtagcctaggctggtccgaaactccctatgta 385
                ||  ||||||||||||||||||||||||||||||||| || ||||||||| ||||
Sbjct: 497 -----aaaatcttttgagacaagtatttgtagcctaggctggccccaaactccctgtgta 551

                                                                       
Query: 386 gctaaggatgatcttgacctgatcctccttcca---aatgccgaggttacaggcatgtgc 442
           || |||||||||||||||||||||||||||||    ||||||||||| |||||||| |||
Sbjct: 552 gccaaggatgatcttgacctgatcctccttcctgccaatgccgaggtgacaggcat-tgc 610

                                                                       
Query: 443 caccatgccagcaatactcttttcatcctctcacatcctcttctacattcactagttact 502
            |||||||||||| ||||| || ||||||| |||||||||| || |||| | ||||||| 
Sbjct: 611 gaccatgccagcagtactcctt-catcctcccacatcctctcctgcatttattagttaca 669

                                                                       
Query: 503 tacttttttctcctttaccaagttattgaatgagttcaaatccagccaaagcaacttata 562
           | || ||| |||||||||| |||||| |||||||||||| |||||||||||||||||| |
Sbjct: 670 tgctcttt-ctcctttacctagttatcgaatgagttcaagtccagccaaagcaacttaga 728

                                                                       
Query: 563 aagacctttatttaaaagaaaaggtaaaaacaggaatggaattaagttggtggtaaaaca 622
           |||| ||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 729 aagatctttccttaaaagaaaaggtaaaaagaggaatggaatttagttggtggtaaaaca 788

                                           
Query: 623 catgcctaacatgtttgagatctttagccttc 654
           | ||||||| ||| ||||||||||||||||||
Sbjct: 789 cttgcctaatatgcttgagatctttagccttc 820


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)