Query= MSMg01no218_e24.b1 MSMg01no218_e24.b1 CHROMAT_FILE:
MSMg01no218_e24.b1 PHD_FILE: MSMg01no218_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:17 2005
(319 letters)
>mm_chr17_15360167_15360886
Length = 720
Score = 580 bits (300), Expect = e-170
Identities = 312/316 (98%), Gaps = 1/316 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccaaaacaaaggaaacattagtttgtcaccgatgctgagcacacagagtgcca 63
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 519 ggaattcccaaaacaaaggaaacatgagtttgtcaccaatgctgagcacacagagtgcca 460
Query: 64 ggtgtgtctttttttgcaattgccactccttggaccaaggggacagtgggccttgttcca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggtgtgtctttttttgcaattgccactccttggaccaaggggacagtgggccttgttcca 400
Query: 124 ggctatgtgaggaccccagtcaattcaaggtgagaaactgtgtctcagacaaatgtgtgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggctatgtgaggaccccagtcaattcaaggtgagaaactgtgtctcagacaaatgtgtgg 340
Query: 184 ctaggatagtacagtgctggggccgaggtatctgaatgttaaaaagagtaaggttcagga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctaggatagtacagtgctggggccgaggtatctgaatgttaaaaagagtaaggttcagga 280
Query: 244 gtaagga-tgctgctatgatctgcatatgttgctgctatgacatcactgttgctggttga 302
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtaaggattgctgctatgatcttcatatgttgctgctatgacatcactgttgctggttga 220
Query: 303 caagtgaccaggatgc 318
||||||||||||||||
Sbjct: 219 caagtgaccaggatgc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_e24.g1 MSMg01no218_e24.g1 CHROMAT_FILE:
MSMg01no218_e24.g1 PHD_FILE: MSMg01no218_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:17 2005
(289 letters)
>mm_chr17_15244818_15245505
Length = 688
Score = 528 bits (273), Expect = e-154
Identities = 285/289 (98%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 1 ataagatggcagccgtgcaactttcctgtcctgatgaaatatgctcttcctttcctctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagatggcagccgtgcaactttcctgtcctgatgaaatatgctcttcctttcctctgt 260
Query: 61 acctagctgatgctgcagctgtccacctgtgtgtgctgtgctgcactgtgcccacctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctagctgatgctgcagctgtccacctgtgtgtgctgtgctgcactgtgcccacctgcc 320
Query: 121 catgggcatccagtgatgctgatatagatgacaatcagcttgctggggtggttgggactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgggcatccagtgatgctgatatagatgacaatcagcttgctggggtggttgggactg 380
Query: 181 gggaacgtcgtctgagctccgttgcagggaactgaccatttcaagcaccttttccttgcg 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggaatgtcgtctgagctccgttgcagggaactgaccatttcaagcaccttttccttgcg 440
Query: 241 cctgcgtctgattcactgagttttagggtcagtcttcccacaggagtgt 289
||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 441 cctgcgtctgaggcactgagttt-agggtcagtcttcccacaggagtgt 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
