Query= MSMg01no237_l14.b1 MSMg01no237_l14.b1 CHROMAT_FILE:
MSMg01no237_l14.b1 PHD_FILE: MSMg01no237_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:37 2005
(302 letters)
>mm_chr17_49968333_49969029
Length = 697
Score = 514 bits (266), Expect = e-150
Identities = 291/302 (96%), Gaps = 5/302 (1%)
Strand = Plus / Plus
Query: 1 ctttcacctcccaacagtccactctcagagcagttaccatgtcctgcttctctctcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttcacctcccaacagtccactctcagagcagttaccatgtcctgcttctctctcagta 260
Query: 61 gtacagcaagctgcagtacagtcattcgttcatctttctttctccgtggctggactctga 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtacagcaagctgcagtacaatcattcgttcatctttctttctccgtggctggactctga 320
Query: 121 gcacttgaaacgcagccatcaaagcttcaatctacccgtccaatctcacatctatgttgt 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcacttgaaacacagccatcaaagcttcaatctacccgtccaatctcacatctatgttgt 380
Query: 181 gtgcctagccctgtgccaacgataaataaacacctctggagggagggaatacgtagatgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 381 gtgcctagccctgtgccaacgataaataaacacctctggagggagggaatacataaatgt 440
Query: 241 ctgtaccctccatggtgagctctcaagtgtagaggctgctctccttgccctttcttatgt 300
|||||| |||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 441 ctgtac-----atggtgagctctcaagtgcagaggctgctctccgtgccctttcttatgt 495
Query: 301 gt 302
||
Sbjct: 496 gt 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 697
Length adjustment: 9
Effective length of query: 293
Effective length of database: 688
Effective search space: 201584
Effective search space used: 201584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_l14.g1 MSMg01no237_l14.g1 CHROMAT_FILE:
MSMg01no237_l14.g1 PHD_FILE: MSMg01no237_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:37 2005
(266 letters)
>mm_chr17_50006613_50007277
Length = 665
Score = 474 bits (245), Expect = e-138
Identities = 258/263 (98%), Gaps = 3/263 (1%)
Strand = Plus / Minus
Query: 5 gaattctctaaaatccacacacatgcaaatgtgctcgtagaataaggca-cccctaaggg 63
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 465 gaattctctaaaatccacacacatgcaaatgtgctcgtagaataaggcaccccctaa--g 408
Query: 64 gggggggggagtggccctttatagcatcacataatgatatgataaaggccgttgtaaaat 123
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggggggggaagtgggcctttatagcatcacataatgatatgataaaggccgttgtaaaat 348
Query: 124 gtaattcccgatgctcagttttgctgagttgactgacgtcccccaccatatggcattcag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gtaattcccgatgctcagttttgctgagttgactgacgtcccccaccatatggcattcag 288
Query: 184 ggtgggagagccatagccccaaacaagcttcccaaaaatagccttatggctgacacctaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggtgggagagccatagccccaaacaagcttcccaaaaatagccttatggctgacacctaa 228
Query: 244 ttacacttgccagcagaggcatt 266
|||||||||||||||||||||||
Sbjct: 227 ttacacttgccagcagaggcatt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 266
Length of database: 665
Length adjustment: 9
Effective length of query: 257
Effective length of database: 656
Effective search space: 168592
Effective search space used: 168592
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
