TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGGGAGTTTCCCTGACCAAAGCAATTAAAGCTTGCTTTAGATTT
GGCTCAAAATTGTGGGGCTGGTTTCTCTGCAGGTGAACAGTGCGCATGCG
TTTAGAAGTCAATGTCAGCTTTCTTCTTCAATCATTTCTCCACCTTATTT
GAAGACAGGCTCTCTGTTGGTTTTGTCTAGGCTCCGCCCCACAGTTACTT
GGCAACAGCCAGGTATATCTGACTCACTATAAAAGGGGCTGCTTGGCCCC
TCCTCTCTCTCTTGCTCTTGCTCATTTCTCTTTCTCTTTACCCTCCCTCT
CCCCATTCCTCTCCCTCCTCTCTATGTGCTCATGGCCCACCTCTACTCCT
CTATGCTCTCTCTCCCTCTTTCTCACTCTCTGCCTTTCTCTCAACTCCCC
TTCCCATGCCCTGAATAAACTCTATTCTATACTGTACTGTCATGTGGCTG
GTACCTCAGGGGGAAGGGATGCCTCACCTTGGACTGTCAGATGCACTCCC
TTTCCCCCCAACCATTCCGGTCCTTCATCAAACATATTCCCTGGCTTCTC
TCTTCTCACTTTTCTTTTAATAAAATCCCACCGTCTCCAAAACTGGTTGA
TTTAACCAATTAAACCCAGAAGAACTTCCTCATCTTTTGCTTCCCTTTAA
AAACCTGTGATCTAGGGGAGTAGGTCATAATTTTT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATACCTTGGGGTTTTTTGTTTTTTTTA
AGACTTCACAATCAAAGAAAAAAAAAGAGTAAAACAAACCAAATGTCCCA
AAGAAAGAGATGGCTGAGCCAGAAGTCAAAGGACCAGTTCACAGTTATCA
AGGCCACTTTTACTCAGGTATGCAATGGAGCCATCACAGTTACCATCTAG
CAAGTGCTGGGCTGTGGAATGCAGAAGAGAGCAGAACCAAACACTTGCCT
AAATCTCATTCACTCTCTTAAAAAAAAAAGAGAGAGAGAGAGATAGAGAA
ATATTTGACTCAATGGGACAGGTGCCTCTAAAGGCAGCATGCCCAATGCT
CCGGTGACCTGTGTTAGGGAGACTTACACTATCCAGAGACAGTTAGAGCT
GGTTTATGGTAGTGAAAGGGACATTAAGAGAAATCCAGGATCGTCATATT
AACTACAGATCTGGACGTGATAGGTGATTAGTGTATGCTAATAAACAAAT
AGTGAATGCCAAGGTATTTGAATAATAATGTTTGAAAAACAGAGGTAGCC
TCTCTGACCTTACCTTCAAGCCACAGCACTATCCCCCTTCTTAGATGAGC
TGCAAGAGGCTTGCTTCAGTGTGTGAATACTTTTCCCAGTGGAAATGCCC
AATGGAATAACTAGATT

Query= MSMg01no261_h12.g1 MSMg01no261_h12.g1 CHROMAT_FILE:
MSMg01no261_h12.g1 PHD_FILE: MSMg01no261_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:52 2005
         (568 letters)



>mm_chr17_42725453_42726420
          Length = 968

 Score =  957 bits (495), Expect = 0.0
 Identities = 556/587 (94%), Gaps = 22/587 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataccttggggttttttgttttttttaagacttcacaatcaaagaaaaaaaaagagtaaa 60
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ataccttggggttttttg--ttttttaagacttcacaatcaaagaaaaaaaaagagtaaa 242

                                                                       
Query: 61  acaaaccaaatgtcccaaagaaagagatggctgagccagaagtcaaaggaccagttcaca 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 243 acaaaccaaatgtcccaaagaaagagatggctaagccagaagtcaaaggaccagttcaca 302

                                                                       
Query: 121 gttatcaaggccacttttactcaggtatgcaatggagccatcacagttaccatctagcaa 180
           |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 303 gttatcaaggccacctttactcaggtatgcagtggagccatcacagttaccatctagcaa 362

                                                                       
Query: 181 gtgctgggctgtggaatgcagaaga-gagcagaaccaaacacttgcctaaatctcattca 239
            |||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||
Sbjct: 363 atgctgggctgtggaatgcagaagagga-cagaaccaaacacttgcctgaatctcattca 421

                                                                       
Query: 240 ctctctt--aaaaaa---------------a-aaagagagagagagagatagagaaatat 281
           |||||||  ||||||               | | ||||||||||||||| ||||||||||
Sbjct: 422 ctctcttgcaaaaaagagagagagagagagagagagagagagagagagagagagaaatat 481

                                                                       
Query: 282 ttgactcaatgggacaggtgcctctaaaggcagcatgcccaatgctccggtgacctgtgt 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgactcaatgggacaggtgcctctaaaggcagcatgcccaatgctccggtgacctgtgt 541

                                                                       
Query: 342 tagggagacttacactatccagagacagttagagctggtttatggtagtgaaagggacat 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagggagacttacactatccagagacagttagagctggtttatggtagtgaaagggacat 601

                                                                       
Query: 402 taagagaaatccaggatcgtcatattaactacagatctggacgtgataggtgattagtgt 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 taagagaaatccaggatcgtcatattaactacagatctggacgtgataggtgattagtgt 661

                                                                       
Query: 462 atgctaataaacaaatagtgaatgccaaggtatttgaataataatgtttgaaaaacagag 521
           || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 662 atactaataaacaaatagtgaatgccaaggtatttgaataataatgtttcaaaaacagag 721

                                                          
Query: 522 gtagcctctctgaccttaccttcaagccacagcactatcccccttct 568
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gtagcctctctgaccttaccttcaagccacagcactatcccccttct 768


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space:   534564
Effective search space used:   534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)