Query= MSMg01no265_a07.b1 MSMg01no265_a07.b1 CHROMAT_FILE:
MSMg01no265_a07.b1 PHD_FILE: MSMg01no265_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:22 2005
(282 letters)
>mm_chr17_7238909_7239590
Length = 682
Score = 468 bits (242), Expect = e-136
Identities = 271/290 (93%), Gaps = 15/290 (5%)
Strand = Plus / Plus
Query: 5 gaattcataaacacaaagcctctagttcttgccattcatgacgtatgtccccaggcatct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gaattcataaacacaaagcctctagttcttgccattcatgacgtatgtccccaggcatct 249
Query: 65 gtcccctgggctactgtccctgggcttctgtcccctaggctactgtccccaggcatctat 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 250 gtcccctgggctactgtccctgggcttctgtcccctgggctactgtccccaggcatctat 309
Query: 125 cccctgggctactgtcccctgggctactgtccc---------------tgggctgtcctt 169
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 310 cccctgggctactgtcccctgggctactgtcccctgggctactgtccctgggctgtcctt 369
Query: 170 tctcacttgagcgctgttgcccatcgtagaaagaggaggcttgcaaccctgttcagcctg 229
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 370 tctcacttgagcgctgttgcccatcgtagagagaggaggcttgcaacactgttcagcctg 429
Query: 230 acatcgttatctttctgcttttatagcaggctagacgtcgtacgatccca 279
|| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 acgtcgttatctttctgcttttatagcaggctagacgtcgtacgatccca 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no265_a07.g1 MSMg01no265_a07.g1 CHROMAT_FILE:
MSMg01no265_a07.g1 PHD_FILE: MSMg01no265_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:22 2005
(241 letters)
>mm_chr17_8111025_8111663
Length = 639
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 1 ctccatcctgagggcctgcagtctaatttggaaagcagggaaatttggaaagtgtgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccatcctgagggcctgcagtctaatttggaaagcagggaaatttggaaagtgtgaaac 260
Query: 61 tagcaactctgaatggggtgggggagtaacccagcaagggaactaattaactcccaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcaactctgaatggggtgggggagtaacccagcaagggaactaattaactcccaaaca 320
Query: 121 ctaacaaagcacaccagagtgttcagtggctccaaataggtagctgcaggtgactctctg 180
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 321 ctaacaaagcacaccagagtgt-cagtggctccaa-taggtagctgcaggtgactctctg 378
Query: 181 tgatgtgcacaccccaagcctgccaaaataagagctctaggatgaggccctgcatgtacg 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgacgtgcacaccccaagcctgccaaaataagagctctaggatgaggccctgcatgtacg 438
Query: 241 g 241
|
Sbjct: 439 g 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 639
Length adjustment: 9
Effective length of query: 232
Effective length of database: 630
Effective search space: 146160
Effective search space used: 146160
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
