Query= MSMg01no268_i08.b1 MSMg01no268_i08.b1 CHROMAT_FILE:
MSMg01no268_i08.b1 PHD_FILE: MSMg01no268_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:49 2005
(327 letters)
>mm_chr17_52171144_52171870
Length = 727
Score = 600 bits (310), Expect = e-176
Identities = 319/322 (99%)
Strand = Plus / Plus
Query: 5 gaattctataggaagcctgaacaagttgggttagggaaacacagaaactattctccttga 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 205 gaattctataggaagcctgaacaagttgggttaggaaaacacagaaactattctccttga 264
Query: 65 aatccagtgacagacatcagccattagagaataaaagtttccacacagcagttatccaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatccagtgacagacatcagccattagagaataaaagtttccacacagcagttatccaga 324
Query: 125 gaagcacatctgatcctggtgtagtactcaattcaagaatccagaggtagggcaagccta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaagcacatctgatcctggtgtagtactcaattcaagaatccagaggtagggcaagccta 384
Query: 185 caaatgggatgccgtgtgggcagtccaacataagtcattgaaagagcaggaaacttaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaatgggatgccgtgtgggcagtccaacataagtcattgaaagagcaggaaacttaagg 444
Query: 245 taggaatcagaagtgctagccccatagcaagccagcactgaaacaagagtgttaggaagg 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 taggaatcagaagtgctagccccatagcaagtcagcactgaaacaagagtgttaggaagg 504
Query: 305 ggcagagcaaactatttttgta 326
|||||||||||||| |||||||
Sbjct: 505 ggcagagcaaactagttttgta 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_i08.g1 MSMg01no268_i08.g1 CHROMAT_FILE:
MSMg01no268_i08.g1 PHD_FILE: MSMg01no268_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:49 2005
(243 letters)
>mm_chr17_52327551_52328193
Length = 643
Score = 393 bits (203), Expect = e-114
Identities = 212/215 (98%), Gaps = 1/215 (0%)
Strand = Plus / Minus
Query: 1 atcatcacccctgcggaaggatgctcaaagctacagtctcattagtactgactcgctttg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 370 atcatcacccctgcggaaggattctcaaagctacagtctcattagtactgactcgctttg 311
Query: 61 ctgcttggatttcaactcaatagagtcaaacacttttgtggctatccactatccactgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 310 ctgcttggatttcaactcaatagagtcaaacacttttgtggctatccactatctactgag 251
Query: 121 aattctggtttctagatttagctatattgttctcacacacccaccccctcgtgtgtg-tg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 250 aattctggtttctagatttagctatattgttctcacacacccaccccctcgtgtgtgatg 191
Query: 180 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 214
|||||||||||||||||||||||||||||||||||
Sbjct: 190 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
