XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ATAATTGGTATCATAAAACCTAGTTAGAAGCTTATGTTTGGGGAGGTTGT
AGGTACTAGCAGGAGAGCTTGCTACTACTGCTTAGCCAATCTAACTAAGC
TTTAAACTGCTTCCTAAATAATTATGTTTATACACATAGACAAATTGCTA
CCCTCAACCTTAGCCAAAGAAGCCTCTCTTACATTGAATGACTCTGAATG
AAGAAACTTGTGGCTGCCTAAGATACTAAGAATAAGTGTTGACTGGGGAC
TGAGACACTGTTATGTGCCCTACTATGGCTCAGAGAAGAAGGGGCAGAAA
GAGTTTAATATTCAGAACAACGCCCGCAAAATGCCATCTTCTAGGCAGAC
ATGGCTACTACCATCACAAGATTACAGTAGCTGCTTAGAAACTGCCCAGA
TTCTCTGCCTCTGGTTGCTGGTCTTCTTAAACAACAGCATAAATATTAGC
TTCAGAAAGTTCTCAGAGGTATGAAAACCCCAGTTCCCTCAATCCTTTCC
TTCCATGCTAGATTCCCCAAAGGCCCAGGGAGGGTCTCTCTCTCTCTCTG
TCTCTCTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TGTCTCTCCCTCCCTCTCTCTGTCCAGAGGGCTTAAAGCTGCATCTCTAT
CTTTCATCCCCCAGTTTGTCTATGAATAAATATATACCTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXGCAGCCGTCTAACTGGTTTGGGAAGTTTTAC
AAAGTTTAATGGGTGTGAATGGAGGAACACCACCGTTTCACAGGCTACGT
TCAAGAATCAGAGAGGAGCTATAAATAGCCCATTTACTTTAAAAAACTAT
GTCCGCTGCAAAAAAAACCAAAAGTAGACGATTATTAATCCTAGAAAGAC
ATTACATCACTGGGTAGTTACGGTAACAGATCATTATTCAAATTTGTTCT
GACACAGACAGTGTCGTGGTTAGGGAGCCAGTGTCACTAATCACCCCTAA
TCGGGGCCTTTTGAAAAGTGTAAAAAGAGCTGTCAATAATTATTTTGGAG
CAGCAATAGAGAATAGTGGTATCCAAAGCAAGTTGGGCATATGTATGGTT
AGTCTAGATATTGATGAATGAGTCCCGGATAAAATTTCCCGAGTCTGTCT
GTGGGATGGGCAGGGGTCCAGAGCTTATCTGGAGTTTTGCTTTGGACCAA
AGCACATTTATTTTTAAAGGCACATTGACCATGTTTACCATACCTGTCTT
GGACAGGCCTTCATAGCCCCCTTTCTACTACTTCCTGGTCAAGCTGGAAT
TACAGAATGATTGGAGTAATTGGACTAGTTGGATCTTCAAAGTGAAATGC
AGTANGTCTCATATTCAACTTCCTACATGAGAACGCAAG

Query= MSMg01no269_p08.g1 MSMg01no269_p08.g1 CHROMAT_FILE:
MSMg01no269_p08.g1 PHD_FILE: MSMg01no269_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:31 2005
         (588 letters)



>mm_chr17_51506654_51507641
          Length = 988

 Score = 1021 bits (528), Expect = 0.0
 Identities = 568/588 (96%), Gaps = 11/588 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcagccgtctaactggtttgggaagttttacaaagtttaatgggtgtgaatggaggaaca 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gcagccgtctaattggtttgggaagttttacaaagtttaatgggtgtgaatggaggaaca 271

                                                                       
Query: 61  ccaccgtttcacaggctacgttcaagaatcagagaggagctataaatagcccatttactt 120
           |||||||||||           |||||||||||||||| |||||||||| ||||||||||
Sbjct: 272 ccaccgtttca-----------caagaatcagagaggatctataaataggccatttactt 320

                                                                       
Query: 121 taaaaaactatgtccgctgcaaaaaaaaccaaaagtagacgattattaatcctagaaaga 180
           |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 321 taaaaaactatgtccgctgcaaaaaaaaccaaaagtggacaattattaatcctagaaaga 380

                                                                       
Query: 181 cattacatcactgggtagttacggtaacagatcattattcaaatttgttctgacacagac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 381 cattacatcactgggtagttacggtaacagatcattattcaaatttgttctgacacagat 440

                                                                       
Query: 241 agtgtcgtggttagggagccagtgtcactaatcacccctaatcggggccttttgaaaagt 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgttgtggttagggagccagtgtcactaatcacccctaatcggggccttttgaaaagt 500

                                                                       
Query: 301 gtaaaaagagctgtcaataattattttggagcagcaatagagaatagtggtatccaaagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaaaaagagctgtcaataattattttggagcagcaatagagaatagtggtatccaaagc 560

                                                                       
Query: 361 aagttgggcatatgtatggttagtctagatattgatgaatgagtcccggataaaatttcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 aagttgggcatatgtatggttagtctagatattgatgaatgagtcccggataaaacttcc 620

                                                                       
Query: 421 cgagtctgtctgtgggatgggcaggggtccagagcttatctggagttttgctttggacca 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagtctgtctgtgggatgggcaggggtccagagcttatctggagttttgctttggacca 680

                                                                       
Query: 481 aagcacatttatttttaaaggcacattgaccatgtttaccatacctgtcttggacaggcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagcacatttatttttaaaggcacattgaccatgtttaccatacctgtcttggacaggcc 740

                                                           
Query: 541 ttcatagccccctttctactacttcctggtcaagctggaattacagaa 588
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcatagccccctttctactacttcctggtcaagctggaattacagaa 788


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space:   565284
Effective search space used:   565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)