Query= MSMg01no270_i01.b1 MSMg01no270_i01.b1 CHROMAT_FILE:
MSMg01no270_i01.b1 PHD_FILE: MSMg01no270_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:10 2005
(676 letters)
>mm_chr17_80389809_80390879
Length = 1071
Score = 1187 bits (614), Expect = 0.0
Identities = 657/674 (97%), Gaps = 9/674 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcctcaccttctttaccacacaatcctgcttcttccttgtcagtgtgtgataa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcctcaccttctttaccacacaatcctgcttcttccttgtcagtgtgtgataa 264
Query: 65 caattccttgattttatttttgagacagggtctcacgttggcctcaaacttactatgtaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caattccttgattttatttttgagacagggtctcacgttggcctcaaacttactatgtaa 324
Query: 125 ctgaggaggtccttgaaccctcctccgtctcaggagtggtaggatttggtgtggcagaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgaggaggtccttgaaccctcctccgtctcaggagtggtaggatttggtgtggcagaat 384
Query: 185 aatggaggcctggctcttggcatgagccaccttaataaagatcctgtggaagatggcaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatggaggcctggctcttggcatgagccaccttaataaagatcctgtggaagatggcaag 444
Query: 245 cttgctcactcccactccatgtctcctctttagatcagtgctccctgcccccaagaaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttgctcactcccactccatgtctcctctttagatcagtgctccctgcccccaagaaaaa 504
Query: 305 agagttttaaccatatct-tcttcccttgaaggcaaatgcaggcagaatcccacagttta 363
|||||||||||| || | |||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 agagttttaaccgta-cagtcttcccttgaaggcaaatgcaggcagaatccca--gttta 561
Query: 364 gagatgagtggctgtagactaggagatacagaggagtgggga-gtgattttcttctctcc 422
|| |||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 562 aagctgagtg----tagactaggagatacagaggagtggggaagtgattttcttctctcc 617
Query: 423 tcagtctcccctttctccatgtacctgcaggctccctattaaacattccaataatggctg 482
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tcagtctcccctttccccaagtacctgcaggctccctattaaacattccaataatggctg 677
Query: 483 tcccctggaccaatccagcacctttgatcagaaggacacggtaatcgtagccttccccac 542
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 678 tcccctggaccaatccagcacctttgatcagaaggacacagtaatcgtagccttccccac 737
Query: 543 ccacatcgcctttcccagccacagcctaggacagattttcccaagccgagagctgaaatt 602
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 738 ccacatcgcctttcccagccacagcctaggacagattttcccaagccgcgagctgaaatt 797
Query: 603 caatcggaggcattcctccggctgtttacttggtgttttcatgcctcacaggttctgggg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 caatcggaggcattcctccggctgtttacttggtgttttcatgcctcacaggttctgggg 857
Query: 663 tgccctctgactga 676
||||||||||||||
Sbjct: 858 tgccctctgactga 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1071
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1061
Effective search space: 706626
Effective search space used: 706626
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_i01.g1 MSMg01no270_i01.g1 CHROMAT_FILE:
MSMg01no270_i01.g1 PHD_FILE: MSMg01no270_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:10 2005
(158 letters)
>mm_chr17_80490160_80490717
Length = 558
Score = 302 bits (156), Expect = 8e-87
Identities = 156/156 (100%)
Strand = Plus / Minus
Query: 1 tttagggcatgcaatgtcttgcacagggagctggctacacatttgctatttctctaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tttagggcatgcaatgtcttgcacagggagctggctacacatttgctatttctctaaact 297
Query: 61 acagagtcagcagaaaaacctttagcaaagacccccaggttttgtctttgagaatccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 acagagtcagcagaaaaacctttagcaaagacccccaggttttgtctttgagaatccatc 237
Query: 121 atggctggtacaaatttatccctgtatagaagtaga 156
||||||||||||||||||||||||||||||||||||
Sbjct: 236 atggctggtacaaatttatccctgtatagaagtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
