Query= MSMg01no272_m18.b1 MSMg01no272_m18.b1 CHROMAT_FILE:
MSMg01no272_m18.b1 PHD_FILE: MSMg01no272_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:02 2005
(319 letters)
>mm_chr17_74122287_74123005
Length = 719
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%)
Strand = Plus / Minus
Query: 5 gaattcagcaaatatagaaaagtataaaaatattatttaaaagtattttatttccagtgt 64
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 570 gaattcagcaaatatagaaaagtataaaaatattatttaagagtattttatttccagtgt 511
Query: 65 gtgtgtgttctcatatgcacatgcccacaagcatgctattaacagggatatggaatagac 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 510 gtgtgtgttctcatatgcacatgcccacaagcatgctattaacaggggtatggaatagac 451
Query: 125 gaagcttccccagtgattgtttaatgtatttttaatgattgcatttgaaataattatttt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 taagcttccccagtgattgtttaatgtatttttaatgattgcatttgaaataattatttt 391
Query: 185 gttcatagactttctgattgctttatcttaattaatgatgcaaattatgcctactagtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gttcatagactttctgattgctttatcttaattaatgatgcaaattatgcctactagtaa 331
Query: 245 cctgcattattattaatagtttttttaaattacagttctatttagctgttgctattatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cctgcattattattaatagtttttttaaattacagttctatttagctgttgctattatga 271
Query: 305 agaacaccattga 317
|||||||||||||
Sbjct: 270 agaacaccattga 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_m18.g1 MSMg01no272_m18.g1 CHROMAT_FILE:
MSMg01no272_m18.g1 PHD_FILE: MSMg01no272_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:02 2005
(282 letters)
>mm_chr17_74036855_74037537
Length = 683
Score = 447 bits (231), Expect = e-130
Identities = 252/259 (97%), Gaps = 3/259 (1%)
Strand = Plus / Plus
Query: 26 gactatccagattccagtgtgctgcggtaagaggtgggaacttgcatgacttgggtggta 85
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gactacccagattccagtgtgctgcggtaagaggtgggaacttgcatgacttgggtggta 285
Query: 86 gaggggtcatgattttgtttgtttc-ttttttttttcttctctcactcgtgcatgatgtc 144
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 286 gaggggtcatgattttgtttgtttcttttttttttttttctctcactcgtgcatgatgtc 345
Query: 145 attttctaagatagaaccagacaaattttcccca-caccttaggcatcccagaagaggtc 203
|||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||
Sbjct: 346 attttctaagatagaaccaggcaaatttcccccatc-ccttaggcatcccagaagaggtc 404
Query: 204 atggtttaaaggatttagaattccagagtctcaaacaaacacatgccaggttggctgttt 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 atggtttaaaggatttagaattccagagtctcaaacaaacacatgccaggttggctgttt 464
Query: 264 ccactctgaagtgacagga 282
|||||||||||||||||||
Sbjct: 465 ccactctgaagtgacagga 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 683
Length adjustment: 9
Effective length of query: 273
Effective length of database: 674
Effective search space: 184002
Effective search space used: 184002
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
