TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAATT
CTAGACTTATTACCGATAATTGTTATAAAATGGCATGTTCATCAAGAGAG
AGGCTGTTCAGGCCCAGTGTACATGTATGCCTCATTCACAACTCTATTAA
GTACACTTAACATGGTTGTAGCCTATTTTTAGTCTTACAAAATACATATA
TTTTAAATATTAACTGTAAAATCTCTAGTCCTTAGGCAGCTAGCAATTTC
ATCTAATGAGTATTTCTTTTATTTGATGATTAATAGAAATATAAAAGAAG
ATCCAGCAATACCACTCTATGGTATATACCAAAAAGATGCCCCACCATGG
CATCAGGGCGCATGTTTCACTTTTCTCATACTAGCCTTGTTTGTGATAGC
CAGAAGTTGGAAACAACCCAGATGTCCCATGACAGAAGAATGGATACAGA
AAATGTGGTTCACTTGCACAATAGAATACTACTCAGCTATTAAGAATGAG
GACATCCTGAGTTTTGCCAACAAATGGCTTCACATAAGGTCTGCCAGACA
GTTCTGGGTGAGAAGGATGAAGACAGGTACTCTAATGTTATAAGAAACCA
AAGAACTGTCCAGGCAACCAGCTGCTTCTCTATTGTAAAGTTTTAGAAGC
TAGATACTCATACTTCCTACATATTCAGATAATAATTTTTCTTGAAACTC
TGAAGGGATTGAATATTAGCTATAGTCTTCCAATCAAGCTTGAGTTG

GACTCGCGGGCGCAGGAGACGCCTGTATCCAAAAGAGGGGNGGAAGAAAG
GGGTTTACAAAAAGAGGGNGGNNGNGGGAAGGNGAANGGAGGGAGGAGGA
GGAAGTTTTTTGCAAGAAAGGAGGGGGGNGAGAAAAAAAGAGAAAGAGGG
AAAAAAGAGGGGAGGGGAAGNAGAGAGAGAGAGAAGAGAGAGGGGAAGGA
GGGGAGGNGGAAAGAGGGGAGGGGAGAAGGGGAAGGAAGAGGAAGGGGAA
GAAAGGAGGGAAAAAGAGGGAAAAGAGAGAAAGAGAAAGGGGGAAAAGAG
GAGGGAAAAATTTTTTGATAAGAGAGAAGGTAAGTGTGTGAGGAGGTGTT
TAATACTCCCCCCCCCCCCCCCGGAAGAAGAGAAAAGAGGGGGGAGGGGG
GGGGGGAAAAAAANNAAAGNAAAAAGGGGGGNNGGNNNGGGGGGAANGAN
AAAGGAGGAGAGAAAAGAAGGGAGAGAGAGGGAGGAAAGGGGGAAGAGGG
AGGGCAAAAAGAACAGGGAAAAGAAGGCAACAGGGCGAAAAGAAAACGGA
GAGCCAGGCGAAGAGACAAGGAGAAACAGAAGAGCGACAAGGGGGGGGGG
AACGAACGGCCGCCGGAGGAGGGGGCGGGAAGGCAGGAGCTGCAGCGAGC
AAAGAAGGCGAAGGATGAGAGAGACGAACGGAAGACGACGGGAAACAGGA
GGGTGTGAAAAATTGATGAAGATGTTGGAGTTATGCTAATGAAGCGGTTC
GTA

Query= MSMg01no272_n23.b1 MSMg01no272_n23.b1 CHROMAT_FILE:
MSMg01no272_n23.b1 PHD_FILE: MSMg01no272_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:07 2005
         (708 letters)



>mm_chr17_39436009_39437116
          Length = 1108

 Score =  785 bits (406), Expect = 0.0
 Identities = 445/458 (97%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattctagacttattaccgataattgttataaaatggcatgttcatcaagagagaggct 66
           |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 458 gaattctagacttattatggataattgttataaaatggcatgttcatcatgagagaggct 399

                                                                       
Query: 67  gttcaggcccagtgtacatgtatgcctcattcacaactctattaagtacacttaacatgg 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 398 gttcaggcccagtgtacatgtatgcctcattcacaactctattaagtacacataacatgg 339

                                                                       
Query: 127 ttgtagcctatttttagtcttacaaaatacatatattttaaatattaactgtaaaatctc 186
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 338 ttgtagcctatttttagtcttacaaagtacatatattttaaatattaactgtaaaatctc 279

                                                                       
Query: 187 tagtccttaggcagctagcaatttcatctaatgagtatttcttttatttgatgattaata 246
           |||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||
Sbjct: 278 tagtccttaggcagctagcaatttcatcgaatgagtatatcttttatttgttgattaata 219

                                                                       
Query: 247 gaaatataaaagaagatccagcaataccactctatggtatataccaaaaagatgccccac 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gaaatataaaagaagatccagcaataccactctatggtatataccaaaaagatgccccac 159

                                                                       
Query: 307 catggcatcagggcgcatgtttcacttttctcatactagccttgtttgtgatagccagaa 366
           |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| 
Sbjct: 158 catggcatcagggcgcatgtttgactttgctcatactagccttgttcgtgatagccagat 99

                                                                       
Query: 367 gttggaaacaacccagatgtcccatgacagaagaatggatacagaaaatgtggttcactt 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  gttggaaacaacccagatgtcccatgacagaagaatggatacagaaaatgtggttcactt 39

                                                 
Query: 427 gcacaatagaatactactcagctattaagaatgaggac 464
           ||||||| ||||||||||||||||||||||||||||||
Sbjct: 38  gcacaatggaatactactcagctattaagaatgaggac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1108
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1098
Effective search space:   766404
Effective search space used:   766404
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)