Query= MSMg01no273_m12.b1 MSMg01no273_m12.b1 CHROMAT_FILE:
MSMg01no273_m12.b1 PHD_FILE: MSMg01no273_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:13 2005
(318 letters)
>mm_chr17_71723360_71724075
Length = 716
Score = 576 bits (298), Expect = e-169
Identities = 308/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Plus
Query: 5 gaattcccagcgccaggtgtgagatggtggcatgagttattaagccagaaaccctgaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccagcgccaggtgtgagatggtggcatgagttattaagccagaaaccctgaaaa 264
Query: 65 caacgtaggccaccatggttgctggcacatattttaccaactgagctatcttcccagcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caacgtaggccaccatggttgctggcacatattttaccaactgagctatcttcccagcct 324
Query: 125 ccagaaaccaagagtttggtaaaagatacctatgaaaagaaaatggccaaattttcacta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccagaaaccaagagtttggtaaaagatacctatgaaaagaaaatggccaaattttcacta 384
Query: 185 ttaggttgggagtaatgttagatgacactatcatcaaagacactcagaagccgcagtgtg 244
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 385 ttaggttgggagtaatgttagatgacactatcatcaaagac--tcagaagctgcagtgtg 442
Query: 245 ttagcaattaacaaccatccaaccaatcaaccaaccaccagttcccacaggaagagaaat 304
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttagcaactaacaaccatccaaccaatcaaccaaccaccagttcccacaggaagagaaat 502
Query: 305 gtcgtaatttat 316
||||||||||||
Sbjct: 503 gtcgtaatttat 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_m12.g1 MSMg01no273_m12.g1 CHROMAT_FILE:
MSMg01no273_m12.g1 PHD_FILE: MSMg01no273_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:13 2005
(287 letters)
>mm_chr17_71838213_71838899
Length = 687
Score = 499 bits (258), Expect = e-146
Identities = 273/278 (98%)
Strand = Plus / Minus
Query: 8 tttctcccccaacaccttcattctttccatcatgaaagaaatgcagaaaagtgtactctt 67
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 tttcttccccaacaccttcattctttccatcatgaaagaaatgcagaaaagtgttctctt 381
Query: 68 gaatgtttaattttcaggagagaaggaaaagatgttggattgagttaggctagacctgga 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaatgtttaattttcaggagagaaggaaaagatgttggattgagttaggctagacctgga 321
Query: 128 gttgactaagagaaggggaaatggctaatcctggcataccaggtgacacagggatggaag 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gttgactaagagaaggggaaatggctaatcctggcataccaggtgacacagggatggaag 261
Query: 188 gggccaaacagggagtaggggatgggagcaagtcatagataaaacaagtccagggggctg 247
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggccaaacagggagtagggggtgggagcaagtcatagataaaacaagtccagggggctg 201
Query: 248 gagagatggctcagcagttaagcgcacagactgctctt 285
|||||||||||||||||||||| |||| ||||||||||
Sbjct: 200 gagagatggctcagcagttaagagcaccgactgctctt 163
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
