Query= MSMg01no279_i12.b1 MSMg01no279_i12.b1 CHROMAT_FILE:
MSMg01no279_i12.b1 PHD_FILE: MSMg01no279_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:08 2005
(311 letters)
>mm_chr17_63790140_63790851
Length = 712
Score = 588 bits (304), Expect = e-172
Identities = 307/308 (99%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 5 gaattcagaaaattcctctt-aaataattgtttgttaattcagttctttggctatcttat 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaattcagaaaattcctcttaaaataattgtttgttaattcagttctttggctatcttat 453
Query: 64 aaatgctgaataaactcatcaagttgaactactgagtctttgaatgagatactaagtaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaatgctgaataaactcatcaagttgaactactgagtctttgaatgagatactaagtaac 393
Query: 124 agcattgaaatatagtcattagacttgttaactcaaattaacagcattatagatttttcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 agcattgaaatatagtcattagacttgttaactcaaattaacagcattatagatttttcc 333
Query: 184 tgtaatactgctactcaaattaagtttaaagaaatataaagtattaaataaacattttcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtaatactgctactcaaattaagtttaaagaaatataaagtattaaataaacattttcc 273
Query: 244 tggaattttgtttgcttcaaatttatttaaacatttgtattgattctgtatagtattgct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tggaattttgtttgcttcaaatttatttaaacatttgtattgattctgtatagtattgct 213
Query: 304 gtagttta 311
||||||||
Sbjct: 212 gtagttta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_i12.g1 MSMg01no279_i12.g1 CHROMAT_FILE:
MSMg01no279_i12.g1 PHD_FILE: MSMg01no279_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:08 2005
(285 letters)
>mm_chr17_63620788_63621472
Length = 685
Score = 536 bits (277), Expect = e-157
Identities = 280/281 (99%)
Strand = Plus / Plus
Query: 1 catcaggttgaattctgtggaaatgcagggagatgtgtctaatccagtcagcatctgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcaggttgaattctgtggaaatgcagggagatgtgtctaatccagtcagcatctgatg 260
Query: 61 aatgcaagagaaattcccattgaactaatgtattagtgccagttactgtattccatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgcaagagaaattcccattgaactaatgtattagtgccagttactgtattccatggaa 320
Query: 121 aggaaaactcattccaaaaagtggaaagcaagatcctaagccctattttcttcctttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaaaactcattccaaaaagtggaaagcaagatcctaagccctattttcttcctttgtc 380
Query: 181 tttctagtcctacaaaaaatatttttctacagcctgaaaccatgaaggaagccctacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctagtcctacaaaaaatatttttctacagcctgaaaccatgaaggaagccctacatc 440
Query: 241 tccatgatctggtcttcctctagactagattggtctgtatc 281
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 tccatgatctggtcttcctctagactagattgatctgtatc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
