Query= MSMg01no280_j04.b1 MSMg01no280_j04.b1 CHROMAT_FILE:
MSMg01no280_j04.b1 PHD_FILE: MSMg01no280_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:26 2005
(239 letters)
>mm_chr17_92999506_93000143
Length = 638
Score = 443 bits (229), Expect = e-129
Identities = 235/237 (99%), Gaps = 1/237 (0%)
Strand = Plus / Plus
Query: 1 gttcttaggtatgttctttatagagggttttttttttccataaaaatatgggcttcttat 60
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 201 gttcttaggtatgttctttatagaggg-tttttttttccataaaaatattggcttcttat 259
Query: 61 tttaatttcttatctgcttatttcattctttagtacttcctccatagtaggatgagtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttaatttcttatctgcttatttcattctttagtacttcctccatagtaggatgagtctt 319
Query: 121 tcaagttcttctaatccatgctttctgctcaattggtatgtttgcagtgctctgtctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcaagttcttctaatccatgctttctgctcaattggtatgtttgcagtgctctgtctagg 379
Query: 181 gaggtgaggaaacccatgggcacggatcttctggggaagaaatactactacatcacc 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaggtgaggaaacccatgggcacggatcttctggggaagaaatactactacatcacc 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_j04.g1 MSMg01no280_j04.g1 CHROMAT_FILE:
MSMg01no280_j04.g1 PHD_FILE: MSMg01no280_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:27 2005
(294 letters)
>mm_chr17_93085054_93085747
Length = 694
Score = 252 bits (130), Expect = 3e-71
Identities = 136/138 (98%)
Strand = Plus / Minus
Query: 157 ccttatcaccttcattcacacactccagccttgggttccattgtaacattttagccaatc 216
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 494 ccttatcaccttcattcacacactccaaccttgggttccattgtaacattttagccaatc 435
Query: 217 aacattgttcacacacacacagacacagggctgggatacatttgtcatttctcttatatt 276
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aacattgttcacacacacagagacacagggctgggatacatttgtcatttctcttatatt 375
Query: 277 gcttatatttattcttta 294
||||||||||||||||||
Sbjct: 374 gcttatatttattcttta 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
