Query= MSMg01no289_n09.b1 MSMg01no289_n09.b1 CHROMAT_FILE:
MSMg01no289_n09.b1 PHD_FILE: MSMg01no289_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:13 2005
(230 letters)
>mm_chr17_44107797_44108425
Length = 629
Score = 414 bits (214), Expect = e-120
Identities = 226/230 (98%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 1 gtgccccatgctattcagcccctatccctactatttggttctcagtcattaccatggcaa 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gtgccccatgccattcagcccctatccctactatttggttctcagtcattaccatggcaa 370
Query: 61 gtgcactggctttgatgtttggctcaactctctgggggagtgcaggctaagatgacaatg 120
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 369 gtgcactggctttgatgtttggctcaactctct-ggggagcacaggctaagatgacaatg 311
Query: 121 aagaggagttttgcttaattgatgtagcttcatcagatttctaatgtgggtcaatttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagaggagttttgcttaattgatgtagcttcatcagatttctaatgtgggtcaatttcta 251
Query: 181 ccctgttacagcttcaaaggaaaactcgcaccttttagtgagttgctaac 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ccctgttacagcttcaaaggaaaactcgcaccttttagtgagttgctaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 629
Length adjustment: 9
Effective length of query: 221
Effective length of database: 620
Effective search space: 137020
Effective search space used: 137020
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no289_n09.g1 MSMg01no289_n09.g1 CHROMAT_FILE:
MSMg01no289_n09.g1 PHD_FILE: MSMg01no289_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:14 2005
(187 letters)
>mm_chr17_43948309_43948895
Length = 587
Score = 354 bits (183), Expect = e-102
Identities = 186/187 (99%)
Strand = Plus / Plus
Query: 1 ggagatgcaattcctttctcaatttgtttgcagtggcatggggagacccaaggtcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggagatgcaattcctttctcaatttgtttgcagtggcatggggagacccaaggtcttctg 260
Query: 61 gaatgttagcaaggtgtttccagatgccctgtgtacacatcagccccaggaggaaatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatgttagcaaggtgtttccagatgccctgtgtacacatcagccccaggaggaaatgag 320
Query: 121 gccgagtgatcacctgggcagcaatcattggttctgtaagagtcatatgaccttgacctg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccgagtgataacctgggcagcaatcattggttctgtaagagtcatatgaccttgacctg 380
Query: 181 cctgagt 187
|||||||
Sbjct: 381 cctgagt 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
