Query= MSMg01no290_c14.b1 MSMg01no290_c14.b1 CHROMAT_FILE:
MSMg01no290_c14.b1 PHD_FILE: MSMg01no290_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:37 2005
(352 letters)
>mm_chr17_52997494_52998245
Length = 752
Score = 615 bits (318), Expect = e-180
Identities = 346/360 (96%), Gaps = 8/360 (2%)
Strand = Plus / Minus
Query: 1 gtctggattttaaatgcatattccttaaaa--------aaacaaacaaacaaacaataaa 52
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 590 gtctggattttaaatgcatattccttaaaaaaacaaacaaacaaacaaacaaacaataaa 531
Query: 53 tttttcccataggtaccaatctcaggttcacagagggtttcatagtcaaaggtgagatat 112
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tttttcccacaggtaccaatctcaggttcacagagggtttcatagtcaaaggtgagatat 471
Query: 113 aagtcatacctgaatagaatattaaaaagtactaagaacttcatggaactagatgagcaa 172
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aagtcacacctgaatagaatattaaaaagtactaagaacttcatggaactagatgagcaa 411
Query: 173 agattgctacatttgcccttaccatctcaattggctggatcttctatgacctactttatg 232
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 410 agattgctacatttgcccttaccatctcaactggctggatcttctatgacctactttatg 351
Query: 233 cctgtctcctcatagaacaattagtaaggtgtagacaagcaaagcatcataggacttgaa 292
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 350 cctgtttcctcatagaacaattagtaaggtgtagacaagcaaagcataataggacttgaa 291
Query: 293 ttgaccagtaatggaaaggtaggactcttagagctgtgtgagattctgggctctgaagtt 352
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 290 ttgaccagtaatggaaaggtaggactcttagagctatgtgagattctgggctctgaagtt 231
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no290_c14.g1 MSMg01no290_c14.g1 CHROMAT_FILE:
MSMg01no290_c14.g1 PHD_FILE: MSMg01no290_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:37 2005
(351 letters)
>mm_chr17_52861954_52862704
Length = 751
Score = 617 bits (319), Expect = 0.0
Identities = 343/351 (97%)
Strand = Plus / Plus
Query: 1 tcatcttttcagcttattataattctaaacaccagtcttttcttatatttgcaaacaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatcttttcagcttattataattctaaacaccagtcttttcttatatttgcaaacaatt 260
Query: 61 acaaagacactatggaaattaatttaaagaacacgccattaagagatatgcagaataaaa 120
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gcaaagacactatggaaattaatttaaagaacatgccattaagagatatgcagaataaaa 320
Query: 121 caatattgcatttacattaaaaatgaggaaaggggtagtacagtaccagttggtttcagc 180
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 321 caatattgcatttacattaaaaatgaggaaaggggtagtagagtacctgttggtttcagc 380
Query: 181 tgtcaccttcatagcctagattcatgtctttgagaacagaagccttcattgaggaatttc 240
|||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcccctttataacctagattcatgtctttgagaacagaagccttcattgaggaatttc 440
Query: 241 ctttatcagactggcctaggggcacatctattggggactgtcatgattcctcattgatgc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttatcaggctggcctaggggcacatctattggggactgtcatgattcctcattgatgc 500
Query: 301 atgagtgccagttcagttaaagcagcaccatccctagctatgtgtgagtca 351
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgagtgccagttcagttaaagcagcaccatccctagctatgtgtgagtca 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
