Query= MSMg01no292_d18.b1 MSMg01no292_d18.b1 CHROMAT_FILE:
MSMg01no292_d18.b1 PHD_FILE: MSMg01no292_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:14 2005
(317 letters)
>mm_chr17_56304708_56305424
Length = 717
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%)
Strand = Plus / Minus
Query: 5 gaattctttatgtcacccgtgaagtgcattcacatccataattgatgtcaccaagcccgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 515 gaattctttatgtcacccgtgaagtgcattcacatccataattgatgtcaccaagccggc 456
Query: 65 catgctccctctccaccccggttgattgtcccaggggccgctgggggctccacctccaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 catgctccctctccaccccggttgattgtcccaggggccgctgggggctccacctccaca 396
Query: 125 gagcaccctgagcagcgcggcccatctgcaccagccttctgggaaatcaagaaagacact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gagcaccctgagcagcgcggcccatctgcaccagccttctgggaaatcaagaaagacact 336
Query: 185 ggggggttcccgaacaggttcccctcaaggatgctgccaggagaatgggaggtggcgggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggggggttcccgaacaggttcccctcaaggatgctgccaggagaatgggaggtggcgggc 276
Query: 245 ctgtgaggcaaagtggcaatgtaccgaagcagtgagtgttgagagggcctacaatatcgc 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ctgtgaggcaaagtggccatgtaccgaagcagtgagtgttgagagggcctacaatatcgc 216
Query: 305 tcagcagataa 315
|||||||||||
Sbjct: 215 tcagcagataa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_d18.g1 MSMg01no292_d18.g1 CHROMAT_FILE:
MSMg01no292_d18.g1 PHD_FILE: MSMg01no292_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:15 2005
(274 letters)
>mm_chr17_56133137_56133809
Length = 673
Score = 522 bits (270), Expect = e-153
Identities = 273/274 (99%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 1 tccgagccggtgaccttagagacaccaggtgactccctcccactcctccctggactccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccgagccggtgaccttagagacaccaggtgactccctcccactcctccctggactccat 260
Query: 61 atttcgcacctgtcttggtgtcctgcgaacccactcttcttaaggattgtaacggggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttcgcacctgtcttggtgtcctgcgaacccactcttcttaaggattgtaacggggtga 320
Query: 121 cctggtcactctagctgctagggaactcaccctcaggcgacagtggctttcttcacttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggtcactctagctgctagggaactcaccctcaggcgacagtggctttcttcacttgg 380
Query: 181 atatcttgcacttttgtgggttttttttttttacttctttttatgaggtgatccatggat 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 atatcttgcacttttgtgggttttttttttt-acttctttttatgaggtgatccatggat 439
Query: 241 tttattttacgaggatgtgtgtgtgtgtgtgtgt 274
||||||||||||||||||||||||||||||||||
Sbjct: 440 tttattttacgaggatgtgtgtgtgtgtgtgtgt 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 673
Length adjustment: 9
Effective length of query: 265
Effective length of database: 664
Effective search space: 175960
Effective search space used: 175960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
