Query= MSMg01no292_j08.b1 MSMg01no292_j08.b1 CHROMAT_FILE:
MSMg01no292_j08.b1 PHD_FILE: MSMg01no292_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:41 2005
(317 letters)
>mm_chr17_66850885_66851601
Length = 717
Score = 569 bits (294), Expect = e-166
Identities = 308/314 (98%), Gaps = 3/314 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagggcatatgagatcctttctcaaaacaacaacaacaacaacaacaacaaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattccagggcatatgagatcctttctcaaaacaacaacaacaacaacaacaacaaca 266
Query: 64 acaacaacaacagagcaccgtgtgcttgtgtaacttctgagccatctttccagccctggt 123
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acaacaaca---gagcagtgtgtgcttgtgtaacttctgagccatctttccagccctggt 323
Query: 124 tcaaagattctttttgctgtctaatacagtcacataagtggcactaattggcaggacagg 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 tcaaagattctttttgctgtctaatacagtcacgtaagtggcactaattggcaggacagg 383
Query: 184 gaaccaactttactatgaatttttccacctcttccaagcagaggactaagggaaacgtga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaccaactttactatgaatttttccacctcttccaagcagaggactaagggaaacgtga 443
Query: 244 gggcatccttaatgccagttgagacaaaattcccctccagtgatgactgggccaatggat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gggcatccttaatgccagttgagacaaaattcccctccagtgatgactgggccaatggat 503
Query: 304 aaaatgatgcggtc 317
||||||||||||||
Sbjct: 504 aaaatgatgcggtc 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_j08.g1 MSMg01no292_j08.g1 CHROMAT_FILE:
MSMg01no292_j08.g1 PHD_FILE: MSMg01no292_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:41 2005
(290 letters)
>mm_chr17_67031332_67032022
Length = 691
Score = 460 bits (238), Expect = e-134
Identities = 266/276 (96%), Gaps = 3/276 (1%)
Strand = Plus / Minus
Query: 1 tcctcagtcccttggaaagagtctccagaacatcccca--tcccacctaacccttccccg 58
||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||
Sbjct: 475 tcctcagtcccttggaaagagtctccagaacat-cccagctcccacctaagtcttccccg 417
Query: 59 tctgtcttgtgtgcagcactatacccctccctcaccgctgtctcctctccgtccctatcc 118
||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 416 tctgtcttgtgaggagcactatacccctccctcaccgctgtctcctctccgttcctatcc 357
Query: 119 atggactcgatgcttcagaaatctattccatcccccttcttattcgtcagactcaaaaga 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atggactcgatgcttcagaaatctattccatcccccttcttattcgtcagactcaaaaga 297
Query: 179 agtgttcaccgtactcagtggatcgaattgcagcagcctttcttccccggcctaggcagc 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agcgttcaccgtactcagtggatcgaattgcagcagcctttcttccccggcctaggcagc 237
Query: 239 catcttccattaacttgccatgatgacacgtactaa 274
||||||||| ||||||||||||||||||||||||||
Sbjct: 236 catcttccagtaacttgccatgatgacacgtactaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
