Query= MSMg01no293_b03.b1 MSMg01no293_b03.b1 CHROMAT_FILE:
MSMg01no293_b03.b1 PHD_FILE: MSMg01no293_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:21 2005
(322 letters)
>mm_chr17_70730029_70730750
Length = 722
Score = 557 bits (288), Expect = e-163
Identities = 312/320 (97%), Gaps = 2/320 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacataaatgcaaaaatcccatatttacattttaactttgtgatgttaaatgcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacataaatgcaaaaatcccatatttacattttaactttgtgatgttaaatgcc 263
Query: 64 agactttaaaaagataattaaagaggtaaggtaaatggaaaacatagagaaaagcagcaa 123
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 264 agactttaaaaagataattttagagttaaggtaaatggaaaacatagagaaaagcagcaa 323
Query: 124 attgttcctaggggtttgacacctaaatatttattctaccaggtggacttaaaaatgaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attgttcctaggggtttgacacctaaatatttattctaccaggtggacttaaaaatgaag 383
Query: 184 cttatctgaagaaatgaaaatgaaaacaatagactttgccaaaacaaaaggcaatggaac 243
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 384 cttatctgaagaaatgaaaatgaaaacaatagacttagccaaaacaaaacgcaatggaac 443
Query: 244 agatggtgcatgagaacaaattctgatgagcctaagacagaagatgac-gaaggatgggc 302
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 444 agatggtgcatgagaacaaattctgatgagcctaagacagaagatgacaga-ggatgggc 502
Query: 303 tgtctccacagtagtgtgag 322
|||||||| |||||||||||
Sbjct: 503 tgtctccatagtagtgtgag 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_b03.g1 MSMg01no293_b03.g1 CHROMAT_FILE:
MSMg01no293_b03.g1 PHD_FILE: MSMg01no293_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:21 2005
(296 letters)
>mm_chr17_70892271_70892965
Length = 695
Score = 545 bits (282), Expect = e-160
Identities = 291/294 (98%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 1 tgattcataatacatctgaaagatgatcagcaagctccacaaagatgagggtagacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tgattcataatacatctgaaagatgatcagcaagctccacaaagatgagggtagacaaag 434
Query: 61 tataaagtcatattgatctagagaggaatctggtttgggattccaaacttacttctgtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tataaagtcatattgatctagagaggaatctggtttgggattccaaacttacttctgtaa 374
Query: 121 atctgctgtcgcttatagaaatgaacattactaagcacagtgaaccactaggcagagctg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 373 atctgctgtcgcttatagaaatgaacactactaagcacagtgaaccactaggcagagctg 314
Query: 181 atttgggcacaagaatcttcaagaactaaggtaagaacagtttgattggctcaatcatgg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atttgggcacaagaatcttcaagaactaaggtaagaacagtttgattggctcaatcatga 254
Query: 241 tgtttctttttgaaatgaatagatgaataaacaactcagttacaagagctgtga 294
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 253 tgtttctttttgaaatgaatagatgaataaacaactca-ttacaagagctgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 695
Length adjustment: 9
Effective length of query: 287
Effective length of database: 686
Effective search space: 196882
Effective search space used: 196882
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
