Query= MSMg01no296_b10.b1 MSMg01no296_b10.b1 CHROMAT_FILE:
MSMg01no296_b10.b1 PHD_FILE: MSMg01no296_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:11 2005
(568 letters)
>mm_chr17_69336636_69337603
Length = 968
Score = 984 bits (509), Expect = 0.0
Identities = 554/569 (97%), Gaps = 2/569 (0%)
Strand = Plus / Minus
Query: 1 aggcccaactctgtcaatcacagtgactttctgtcaccttttgagaggtccgggatagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 768 aggcccaactctgtcaatcacagtgactttctgtcaccttttgagaggtcccagatagtt 709
Query: 61 atcggttacgatctgacacagtgaagaagaaaccagaagagtactagaagaccagagggg 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 atcggttacgatcttacacagtgaagaagaaaccagaagagtactagaagaccagagggg 649
Query: 121 acattcgagaaggaagatattaaga-ttttttcattcttctaatttttacagaatggtat 179
|||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 648 acataccagaaggaagatattaagatttttttcattcttctaatttttacagaatggtat 589
Query: 180 ttagttgccagtcttatggccacatcttagtgaagataaaattttctatactacgtggtc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ttagttgccagtcttatggccacatcttagtgaagataaaattttctatactacgtggtc 529
Query: 240 aaaaataggcccagaagcaccaatgtgtactgtgacctggttgtaactatggctgcctgc 299
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 528 aaaaataggcccagaagcaccagtgtgtactgtgacctggttgtaactatggctgcctgc 469
Query: 300 tttgaaaaacaattgctcagacaagaggtagaaaagagcctatttcttaagacagaaaac 359
||||| ||||||||||||||||| |||| |||||||||| || |||||||||||||||||
Sbjct: 468 tttgagaaacaattgctcagacaggaggcagaaaagagcatacttcttaagacagaaaac 409
Query: 360 atttgcatccaggtaaagagtgcatgtagaagtctggggggtgtcttgatttttttccaa 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 408 atttgcatccaggtaaagagtgcatgtagaagtctgggggttgtcttgatttttttccaa 349
Query: 420 gtgggagaaatcttgagtagaactgcacaggatcagagtcggctcatttctgtcatttac 479
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 348 gtgggagaaattttgagtagaactgcacag-atcagagtcggctcatttctgtcatttac 290
Query: 480 tctagcatgtcgttattcccacttccagttagagagagctctcctctcctgcatcttgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tctagcatgtcgttattcccacttccagttagagagagctctcctctcctgcatcttgaa 230
Query: 540 tgcagagtgatgtctggacctccagagcc 568
|||||||||||||||||||||||||||||
Sbjct: 229 tgcagagtgatgtctggacctccagagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_b10.g1 MSMg01no296_b10.g1 CHROMAT_FILE:
MSMg01no296_b10.g1 PHD_FILE: MSMg01no296_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:12 2005
(283 letters)
>mm_chr17_69176367_69177049
Length = 683
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%)
Strand = Plus / Plus
Query: 1 ccgaggtgatccagcgtctgtgtgctcactaatgatcagcagaagggagtaagtaaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccgaggtgatccagcgtctgtgtgctcactaatgatcagcagaagggagtaagtaaacag 260
Query: 61 tagtctgatgtgtggcaactgacagaggtactgcagatgcgctgaaacctggaactgatg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tagtctgatgtgtggcaactgacagaggtactgcagatgcactgaaacctggaactgatg 320
Query: 121 gcaaaggattggtttgaatgcacaaaatgtgctaggggcagggaaatgccttccagctgg 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaaaggattggtttgaatgcagaaaatgtgctaggggcagggaaatgccttccagctgg 380
Query: 181 agaaaatgccaacacctctggggtattattgtctggagaaacaagcaagctaatgatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaaatgccaacacctctggggtattattgtctggagaaacaagcaagctaatgatgta 440
Query: 241 aagaaatgtgaaaagcagcagggctgaagcagaccaggatgtc 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaaatgtgaaaagcagcagggctgaagcagaccaggatgtc 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
