Query= MSMg01no296_h06.b1 MSMg01no296_h06.b1 CHROMAT_FILE:
MSMg01no296_h06.b1 PHD_FILE: MSMg01no296_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:39 2005
(337 letters)
>mm_chr17_44843009_44843745
Length = 737
Score = 545 bits (282), Expect = e-159
Identities = 302/314 (96%), Gaps = 9/314 (2%)
Strand = Plus / Minus
Query: 1 ccaacaataattgaagtaaagctatcacttgaaaatgtactaaccttcaaataatgacac 60
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 305 ccaacaataattgaagtaaagctatcacttgaaaatgcactaacctccaaataatgacac 246
Query: 61 aaataggaagtggcaaaaatccttagagaagaaacatcagaagaaggggctggagggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aaataggaagtggcaaaaatccttagagaagaaacatcagaagaaggggctggagggata 186
Query: 121 gctcagtggttaagatcattgactgctcttctaaaggtcatgggttcaattcccagcacc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gctcagtggttaagatcattgactgctcttctaaaggtcatgggttcaattcc------- 133
Query: 181 cacagagcagcgcataaccatctgtaagtccagttccaggggagccaagaccctcttcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 --cagagcagcgcataaccatctgtaagtccagttccaggggagccaagaccctcttcgg 75
Query: 241 gcctcctcagacactaggcacgaaagttgtatgtggtaatctgtgcaggcattaacacct 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 74 gcctcctcagacactaggcacgaaagttgtatgtagtaatctgtgcaggcattaacacct 15
Query: 301 atgcacataaattt 314
||||||||||||||
Sbjct: 14 atgcacataaattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_h06.g1 MSMg01no296_h06.g1 CHROMAT_FILE:
MSMg01no296_h06.g1 PHD_FILE: MSMg01no296_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:39 2005
(289 letters)
>mm_chr17_44674653_44675341
Length = 689
Score = 462 bits (239), Expect = e-135
Identities = 278/291 (95%), Gaps = 4/291 (1%)
Strand = Plus / Plus
Query: 1 tttgaccctgccatccattttactagctagcccaaacctgaaagatggaacccagagcca 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tttgaccctgccatccattttactagctagcccaaacctgaaagatggaatccagagcca 260
Query: 61 ccattcaggaagaggaagatggaccatgggagacaaggtcggtgatagattttggaggac 120
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ccattcaggaagaggaaggtggaccgtgggagacaaggtcggtgatagattttggaggac 320
Query: 121 accgagtccaacgttacttcttaaaaataaggggaaa-gaggttttgagatgttattgta 179
|||||||||||| |||||| ||||||||||||| ||| || |||||||||||||||||||
Sbjct: 321 accgagtccaacattactttttaaaaataaggg-aaatgaagttttgagatgttattgta 379
Query: 180 taatcctatgaagattccacagaactcaggggctgag-ccagacaccatcaactgcttct 238
||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 380 taatcctatgaagattccacagaactcaggggctg-gaccagacaccaacaactgcttct 438
Query: 239 atttgccttcctttctggatttgtttggaacatttatcactgtgagatctg 289
||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 439 atttgccttcccttctggacttgtttggaacatttatcactgtgagatctg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
