Query= MSMg01no296_h19.b1 MSMg01no296_h19.b1 CHROMAT_FILE:
MSMg01no296_h19.b1 PHD_FILE: MSMg01no296_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:41 2005
(317 letters)
>mm_chr17_72118499_72119215
Length = 717
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%)
Strand = Plus / Plus
Query: 4 ggaattccacggagctttgtctcatgaacacacctgaagaagtttcaggcattcagaaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacggagctttgtctcatgaacacacctgaagaagtttcaggcattcagaaaa 263
Query: 64 gttgctgtggagggaggcctgagtggaaatcagggtgattgatctctttggtaacttgac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttgctgtggagggaggcctgagtggaaatcagggtgattgatctctttggtaacttgac 323
Query: 124 agacactttgaaagggttaaagcatccgagcttcttccctgttgtgaaatgaagggcttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agacactttgaaagggttaaagcatccgagcttcttccctgttgtgaaatgaagggcttg 383
Query: 184 tagagcttactagggtcctttgcccgtttggctaagcactaagttcagggtcctaattag 243
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 384 tagagcttactagggtcctttgcccgtttggctaagcactaaattcagggtcctaattag 443
Query: 244 tacctggccctttaaatcttgtatccctagcgccaaggtttgtcattgttaggcattggt 303
| |||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct: 444 tgcctggccctttaaatcttgtatccatagtgccaaggcatgtcattgttaggcattggt 503
Query: 304 tgcctgtggtgacc 317
||||||||||||||
Sbjct: 504 tgcctgtggtgacc 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_h19.g1 MSMg01no296_h19.g1 CHROMAT_FILE:
MSMg01no296_h19.g1 PHD_FILE: MSMg01no296_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:41 2005
(292 letters)
>mm_chr17_72283052_72283747
Length = 696
Score = 489 bits (253), Expect = e-143
Identities = 284/299 (94%), Gaps = 10/299 (3%)
Strand = Plus / Minus
Query: 1 tggtaattcttgtgaaattgctgggctttaaagaagaag-------aaaaaaacctttgg 53
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 496 tggtaattcttgtgaaattgatgggctttaaagaagaagaagaagaaaaaaaacctttgg 437
Query: 54 ccacctaaaagggaaattagattgttagctttcaaaaatactaatgtgttatatcataag 113
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 436 ccacctaaaggggaaattagattgttagctttcaaaaatactagtgtgttatatcataag 377
Query: 114 aaaataaagcagtatattgttacgaactatggggcaagagtatcaatatcaaaaaaaaaa 173
|||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||
Sbjct: 376 aaaataaagcagtatattgttaagacctatggggcaagagtatcaatatc--aaaaaaaa 319
Query: 174 gttaattttcttctctgccttcttccccttccccagcgcttccctctttcctatttctac 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttaattttcttctctgccttcttccccttccccagcgcttccctctttcctatttctac 259
Query: 234 aaaatcaacttaaacctgagattcagacaataaaaataactgaaaaaaattcaaaatga 292
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 258 aaaatcaacttaaacctgagattcagacaataaaaataactg-aaaaaattcaaaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 696
Length adjustment: 9
Effective length of query: 283
Effective length of database: 687
Effective search space: 194421
Effective search space used: 194421
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
