Query= MSMg01no296_p08.b1 MSMg01no296_p08.b1 CHROMAT_FILE:
MSMg01no296_p08.b1 PHD_FILE: MSMg01no296_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:17 2005
(588 letters)
>mm_chr17_51686256_51687244
Length = 989
Score = 1116 bits (577), Expect = 0.0
Identities = 586/589 (99%), Gaps = 1/589 (0%)
Strand = Plus / Plus
Query: 1 ggtcactgccaaccggctcatatttcctttgggctctagctatttgggccaatcattttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtcactgccaaccggctcatatttcctttgggctctagctatttgggccaatcattttc 260
Query: 61 atggctggtttaaagagcatgtgcctaatttagagctgctgacaccaggcagggaacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggctggtttaaagagcatgtgcctaatttagagctgctgacaccaggcagggaacagg 320
Query: 121 ccacctggcaaatgccttgggctttgaatgcttccactgacttgaagcccaggccaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacctggcaaatgccttgggctttgaatgcttccactgacttgaagcccaggccaagtt 380
Query: 181 cccctcaagttgtactgaggtttgtaagcttttttggcaaatgctgggctcagactggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccctcaagttgtactgaggtttgtaagcttttttggcaaatgctgggctcagactggac 440
Query: 241 caggtaatcagggtttcatggtcctcagctaggtgtgaaattttaatcaaagggatttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggtaatcagggtttcatggtcctcagctaggtgtgaaattttaatcaaagggatttta 500
Query: 301 tttttgcaaaaatatagcacaccaccagaaatgtcacatagaaccaagctttggcttcac 360
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 tttttgcaaaaatatagcacaccaccagaaatgtcacatagaattaagctttggcttcac 560
Query: 361 tgagttttgagatggtacatcacaaaatagccagctttgttctctttggtaggaaggcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagttttgagatggtacatcacaaaatagccagctttgttctctttggtaggaaggcaa 620
Query: 421 tagtgttaaaaataaatgggactggggtagttctaccccccccc-ttagtcttatggaaa 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 tagtgttaaaaataaatgggactggggtagttctaccccccccccttagtcttatggaaa 680
Query: 480 aatacaacaattttagttcatctacaatttggaaaaatactttccactttaattgtaaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatacaacaattttagttcatctacaatttggaaaaatactttccactttaattgtaaaa 740
Query: 540 tggtccaggcagtacttaaggttcattctttaaacacactgtccagatc 588
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggtccaggcagtacttaaggttcattctttaaacacactgtccagatc 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 989
Length adjustment: 10
Effective length of query: 578
Effective length of database: 979
Effective search space: 565862
Effective search space used: 565862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_p08.g1 MSMg01no296_p08.g1 CHROMAT_FILE:
MSMg01no296_p08.g1 PHD_FILE: MSMg01no296_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:17 2005
(286 letters)
>mm_chr17_51899828_51900513
Length = 686
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%)
Strand = Plus / Minus
Query: 1 agaatgtgggtgagagcacacaagaagaatcggaatggacagattgtcccctctgcagac 60
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 486 agaatgtgggtgagagcacacaagaagaatcggaatggacagaatgtcgggtctgcagac 427
Query: 61 tccagagagaaggagggaggttttactggagtaaaagtccagtactgcttatcattccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tccagagagaaggagggaggttttactggagtaaaagtccagtactgcttatcattccaa 367
Query: 121 aatatgctttgttgctttttattcctcctctctggcagaccacacagggcttgttctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aatatgctttgttgctttttattcctcctctctggcagaccacacagggcttgttctgaa 307
Query: 181 gaacattttcactaatctgatcaggcagccaaatacgccgggaaaactgctttaatgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gaacattttcactaatctgatcaggcagccaaatacgccgggaaaactgctttaatgatc 247
Query: 241 ccactaattacctcaagtcaatatgaactgtattattagactgagg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ccactaattacctcaagtcaatatgaactgtattattagactgagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
