TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTGGTTATCGGAAATTGTCAGGATAAGAAGAAAGGTAAAATCTGTC
TGTGCTTTTGTGATGATTTCAGATAAACTGTAACATTTAATTGCAGAAAA
ATAACACAAGTAGAAATAATGATTCATTTAGTGTAGAAAGGAAGCAAGAA
TAAATGTGCTGGATGCTAAATAAATGGATAATAAAAACAGAAGAATCAAA
GGATATTTCCAAAAGAAAGCAAAAAATCTCTTCTCCAATCTTTTGTTGAA
ATGCTTCTGTCTGTATACATATCAATGCTATATATAATATGATGTAATAC
CAGACTGTCTTAATCCTGAACTACATTTGTAACTTAGACAAAAGAATTCA
AAGCTGGGGAGACAGTTCAAAGGTTAAGGGTCATTACTGATCTTGGAAAA
AGACTTCAGTTGCACCCCCAGCCACCACATGTAATGGCAGGCTACTGCCT
ATAACTTTAATTCTTGTGGATACAGTGCCCTCTTCTGGTGTCTGGGGGTA
CCTGCATGCATGTAGTACACATAAACTCATACAGACACAATAAAAACAAA
CAAACAAATAATCTTTCTTGAAAAGAAGGTTATGGTTGGGGGATGGAGAG
ATGGCTCAGAGGTTAAGAGCACTTTTTGCTGCTCTTCCAGAGGTTCTGAG
CTCAATTCTCAGCAACCACATAACAATCTACAACAATCTCTGCAT

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGAGGAGAAAGAGGAA
CACTCCTCCATTTTTGGTGGGCTTGCAAGCTGGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAAGATCC
AGCAATACCTCTTCTGGGCATATATCCAGAAAAGGTCCCAACCGGTAAGA
AGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGA
TGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT
GTGGTACATTTACACAATGGAATACTACTCAGCTATTAAAAAAAATGAAC
TTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCACCCTGAGT
GAGGTAACCCAAACACAAAGGAACTCGTACAATATGTACTCACTGATAAG
TGGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGATACAACTTG
CTAAACACATGAAATTCATGAAGAACTAAGACCAAAGTGTGGACAC

Query= MSMg01no298_f05.b1 MSMg01no298_f05.b1 CHROMAT_FILE:
MSMg01no298_f05.b1 PHD_FILE: MSMg01no298_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:59 2005
         (701 letters)



>mm_chr17_54867091_54868186
          Length = 1096

 Score = 1033 bits (534), Expect = 0.0
 Identities = 550/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttggttatcggaaattgtcaggataagaagaaaggtaaaatctgtctgtgcttt 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gaattcttggttattggaaattgtcaggataagaagaaaggtaaaatctgtctgtgcttt 494

                                                                       
Query: 65  tgtgatgatttcagataaactgtaacatttaattgcagaaaaataacacaagtagaaata 124
           ||||||||||||||||||||||||||     |||||||||||||||||||||| ||||||
Sbjct: 493 tgtgatgatttcagataaactgtaac-----attgcagaaaaataacacaagtggaaata 439

                                                                       
Query: 125 atgattcatttagtgtagaaaggaagcaagaataaatgtgctggatgctaaataaatgga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atgattcatttagtgtagaaaggaagcaagaataaatgtgctggatgctaaataaatgga 379

                                                                       
Query: 185 taataaaaacagaagaatcaaaggatatttccaaaagaaagcaaaaaatctcttctccaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taataaaaacagaagaatcaaaggatatttccaaaagaaagcaaaaaatctcttctccaa 319

                                                                       
Query: 245 tcttttgttgaaatgcttctgtctgtatacatatcaatgctatatataatatgatgtaat 304
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 318 tcttttgttgaaatgcttctgtctgtatacatatgaatgctatatataatatgatgtaat 259

                                                                       
Query: 305 accagactgtcttaatcctgaactacatttgtaacttagacaaaagaattcaaagctggg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 accagactgtcttaatcctgaactacatttgtaacttagacaaaagaattcaaagctggg 199

                                                                       
Query: 365 gagacagttcaaaggttaagggtcattactgatcttggaaaaagacttcagttgcacccc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gagacagttcaaaggttaagggtcattactgatcttggaaaaagacttcagttgcacccc 139

                                                                       
Query: 425 cagccaccacatgtaatggcaggctactgcctataactttaattcttgtggatacagtgc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cagccaccacatgtaatggcaggctactgcctataactttaattcttgtggatacagtgc 79

                                                                       
Query: 485 cctcttctggtgtctgggggtacctgcatgcatgtagtacacataaactcatacagacac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  cctcttctggtgtctgggggtacctgcatgcatgtagtacacataaactcatacagacac 19

                             
Query: 545 aataaaaacaaacaaaca 562
           ||||||||||||||||||
Sbjct: 18  aataaaaacaaacaaaca 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1096
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1086
Effective search space:   750426
Effective search space used:   750426
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)