Query= MSMg01no301_c05.b1 MSMg01no301_c05.b1 CHROMAT_FILE:
MSMg01no301_c05.b1 PHD_FILE: MSMg01no301_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:28 2005
(330 letters)
>mm_chr17_6142019_6142748
Length = 730
Score = 632 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Plus
Query: 4 ggaattctcagatttcccaagagttattaaggtataaaagtcatttgtacttcttcttcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcagatttcccaagagttattaaggtataaaagtcatttgtacttcttcttcc 263
Query: 64 ctttttaaacctactgcacagtgtgcatcacaattccagaaaggacaggaatgtctggat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttttaaacctactgcacagtgtgcatcacaattccagaaaggacaggaatgtctggat 323
Query: 124 catgagaacaatcttttaagttcagttttatggctctgtcatgctctgtggtgaagactc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catgagaacaatcttttaagttcagttttatggctctgtcatgctctgtggtgaagactc 383
Query: 184 gaaccagactcctgctctgcacaaggataacagaagatctgaaaacactttgttgttgat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaccagactcctgctctgcacaaggataacagaagatctgaaaacactttgttgttgat 443
Query: 244 ttctttcaaaacatggtttctttgtgtagccttggctggcttgaaacttgttctatacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttctttcaaaacatggtttctttgtgtagccttggctggcttgaaacttgttctatacac 503
Query: 304 ctcaaactcacagtttttttttttttt 330
|||||||||||||||||||||||||||
Sbjct: 504 ctcaaactcacagtttttttttttttt 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_c05.g1 MSMg01no301_c05.g1 CHROMAT_FILE:
MSMg01no301_c05.g1 PHD_FILE: MSMg01no301_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:28 2005
(608 letters)
>mm_chr17_6205310_6206317
Length = 1008
Score = 961 bits (497), Expect = 0.0
Identities = 506/509 (99%)
Strand = Plus / Minus
Query: 1 agtgtccaccctgaatcacaggtcgcacgtgatcaaactccatgagatgggaagactctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 agtgtccaccctgaatcacaggtcgcacgtgatcaaactccatgagatgggaagactctg 450
Query: 61 ctgctgcagctggagcactctgtagtacctgagttcttcacctgctggagaagccacaga 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 449 ctgctgcagctggagcactctgtagtgcctgagttcttcacctgctggagaagccagaga 390
Query: 121 gcactccctgaggcaaggcagtcagtctcctgctcctttctcattaagtcagaacagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gcactccctgaggcaaggcagtcagtctcctgctcctttctcattaagtcagaacagagc 330
Query: 181 agaaaccaggaaatagctccagagcttcagacatagaacagaaaaggctgcaagcacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agaaaccaggaaatagctccagagcttcagacatagaacagaaaaggctgcaagcacctg 270
Query: 241 aaatcatgcaactaccaataaacaatatttctcatatgaattaaaatcaaactacaaaac 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 269 aaatcatgcaactaccaataaacagtatttctcatatgaattaaaatcaaactacaaaac 210
Query: 301 aaaaaaaaatttgtttgtttgtttgtttgttttttgagacagggtttctctgcatagccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aaaaaaaaatttgtttgtttgtttgtttgttttttgagacagggtttctctgcatagccc 150
Query: 361 tggctgtcctggaactcagtcgaaaacaaaattttttaaaaaatcaaataactatcctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tggctgtcctggaactcagtcgaaaacaaaattttttaaaaaatcaaataactatcctgg 90
Query: 421 ttaccaagatttccaatacaaaaggagagggaaccggaggacatatctacagtgtgctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ttaccaagatttccaatacaaaaggagagggaaccggaggacatatctacagtgtgctct 30
Query: 481 gcatacctgatgccagatcgtgtgtgtct 509
|||||||||||||||||||||||||||||
Sbjct: 29 gcatacctgatgccagatcgtgtgtgtct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
