Query= MSMg01no311_o23.b1 MSMg01no311_o23.b1 CHROMAT_FILE:
MSMg01no311_o23.b1 PHD_FILE: MSMg01no311_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:54 2005
(380 letters)
>mm_chr17_31720925_31721704
Length = 780
Score = 603 bits (312), Expect = e-177
Identities = 346/362 (95%), Gaps = 11/362 (3%)
Strand = Plus / Plus
Query: 25 agctacacagagaaaccctatttcaataagcaacacaatacaaaaaacaacattttcaac 84
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 220 agctacacagagaaaccctatttcaataagcaacacaatacaaaaaacaaca---tcaac 276
Query: 85 --c-acaatacaaaacaaaacaggcagccgggcatggtggtgcacgcctttaatcccagc 141
| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 277 aacaacaatacaaaacaaaacaggcagccaggcatgatggtgcacgcctttaatcccagc 336
Query: 142 actcgggaggcagaggtaggcagatttctgagttcaaggccagcctggtctacagagtga 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 actcgggaggcagaggtaggcagatttctgagttcaaggccagcctggtctacagagtga 396
Query: 202 gttccaggacagccagggctacacagagaaaccctgtctcgaaaaaccaaaccaaaccaa 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gttccaggacagccagggctacacagagaaaccctgtctcgaaaaaccaaaccaaaccaa 456
Query: 262 accaaaccaaa-----acaggtactgacctagcatttgtgaagacctgggttgatctcac 316
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 accaaaccaaaccgaaacaggtactgacctagcatttgtgaagacctgggttgatctcac 516
Query: 317 ctctgagatatataaaagacagaaaacccagatgggtatttgtggctttgcaatgctagt 376
| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ccctgagaaataaaaaagacagaaaacccagatgggtatttgtggctttgcaatgctagt 576
Query: 377 aa 378
||
Sbjct: 577 aa 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_o23.g1 MSMg01no311_o23.g1 CHROMAT_FILE:
MSMg01no311_o23.g1 PHD_FILE: MSMg01no311_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:54 2005
(168 letters)
>mm_chr17_31874180_31874747
Length = 568
Score = 317 bits (164), Expect = 2e-91
Identities = 164/164 (100%)
Strand = Plus / Minus
Query: 1 aatcacgctcttttgaataacacactttggtactgctgtagttttatgatccaaaagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aatcacgctcttttgaataacacactttggtactgctgtagttttatgatccaaaagtta 268
Query: 61 gtttgttaaccatcagcatcgtgtgtgccaattccccaaaccctgtgccaatcgttgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtttgttaaccatcagcatcgtgtgtgccaattccccaaaccctgtgccaatcgttgcag 208
Query: 121 ggttttgttgttttgggttgttttgttttgttttgtttttgaga 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggttttgttgttttgggttgttttgttttgttttgtttttgaga 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
